Variant report

Variant	rs7529625
Chromosome Location	chr1:211156698-211156699
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10863872	0.95[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs10863873	0.92[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs11119654	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11119668	0.83[EUR][1000 genomes]
rs12022715	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12022739	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12027535	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12043937	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12043952	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12070402	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12403500	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1501548	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1501549	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1501550	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1532682	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs58255417	0.85[EUR][1000 genomes]
rs61850228	0.87[EUR][1000 genomes]
rs6540648	0.85[EUR][1000 genomes]
rs6659020	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6663672	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6666342	0.83[EUR][1000 genomes]
rs6687069	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6689715	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7515316	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7523929	0.81[ASN][1000 genomes]
rs7537597	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7551412	0.80[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211152600-211169400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211152800-211183400	Weak transcription	HSMMtube	muscle
3	chr1:211154200-211161800	Weak transcription	HSMM	muscle
4	chr1:211155400-211161200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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