Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10753780	0.86[EUR][1000 genomes]
rs10753781	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10800392	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10800393	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10919006	0.88[ASN][1000 genomes]
rs10919011	0.80[EUR][1000 genomes]
rs1322499	0.86[ASN][1000 genomes]
rs1407477	0.97[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs1885557	0.85[EUR][1000 genomes]
rs34298853	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4656163	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4656622	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4656624	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6427155	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6666564	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6683127	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6683236	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6683991	0.88[EUR][1000 genomes]
rs7525262	0.85[EUR][1000 genomes]
rs7550083	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs857633	0.85[EUR][1000 genomes]
rs857635	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869415	chr1:168467284-169153863	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
2	nsv437258	chr1:168824111-168890420	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:168857000-168862000	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr1:168857200-168862000	Weak transcription	Skeletal Muscle Female	skeletal muscle

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