The 2.0 version of rSNPBase

Variant report

Variant rs7550868
Chromosome Location chr1:93760999-93761000
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93692200-93787800 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:93720000-93762000 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr1:93728600-93764400 Weak transcription Psoas Muscle Psoas
4 chr1:93728600-93769400 Weak transcription Rectal Smooth Muscle rectum
5 chr1:93728600-93770400 Weak transcription HSMM muscle
6 chr1:93728800-93778200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:93729000-93790200 Weak transcription Osteobl bone
8 chr1:93729800-93763200 Weak transcription Pancreas Pancrea
9 chr1:93731000-93765400 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:93731200-93787400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:93736400-93771200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:93739600-93766600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:93743600-93770200 Weak transcription Fetal Kidney kidney
14 chr1:93745800-93780200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:93746600-93789400 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:93746800-93780000 Weak transcription Aorta Aorta
17 chr1:93751200-93761800 Weak transcription Spleen Spleen
18 chr1:93751600-93794600 Weak transcription Brain Substantia Nigra brain
19 chr1:93753000-93778200 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr1:93753000-93803600 Weak transcription Adipose Nuclei Adipose
21 chr1:93753200-93806400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr1:93753600-93770200 Weak transcription Brain Cingulate Gyrus brain
23 chr1:93754800-93765200 Weak transcription Fetal Intestine Small intestine
24 chr1:93755000-93762200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:93755400-93770200 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:93755400-93778600 Weak transcription Stomach Smooth Muscle stomach
27 chr1:93755400-93778800 Weak transcription Ovary ovary
28 chr1:93755400-93802600 Weak transcription Primary B cells from cord blood blood
29 chr1:93755400-93803200 Weak transcription Fetal Thymus thymus
30 chr1:93755600-93765000 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr1:93755600-93768400 Weak transcription Thymus Thymus
32 chr1:93755600-93772800 Weak transcription GM12878-XiMat blood
33 chr1:93755600-93775200 Weak transcription Left Ventricle heart
34 chr1:93755600-93780200 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr1:93755600-93803400 Weak transcription Fetal Intestine Large intestine
36 chr1:93755600-93804200 Weak transcription Brain Anterior Caudate brain
37 chr1:93755800-93790200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:93755800-93801400 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr1:93756000-93765200 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr1:93756000-93767000 Weak transcription Primary B cells from peripheral blood blood
41 chr1:93756000-93778800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:93756000-93785600 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:93756000-93803800 Weak transcription Primary T cells fromperipheralblood blood
44 chr1:93756200-93764600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr1:93756200-93770600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:93756200-93777000 Weak transcription Fetal Stomach stomach
47 chr1:93756200-93777400 Weak transcription Fetal Muscle Leg muscle
48 chr1:93756200-93777600 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:93756200-93782600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:93756400-93762400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015