Variant report

Variant	rs7570755
Chromosome Location	chr2:234782453-234782454
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10172275	0.88[ASN][1000 genomes]
rs10180847	1.00[CHB][hapmap]
rs10203291	1.00[CHB][hapmap];0.86[JPT][hapmap];0.92[ASN][1000 genomes]
rs10519356	1.00[CHB][hapmap];0.86[JPT][hapmap];0.96[ASN][1000 genomes]
rs10929320	1.00[YRI][hapmap]
rs11563009	1.00[YRI][hapmap]
rs11678741	1.00[YRI][hapmap]
rs11682848	1.00[YRI][hapmap]
rs12692249	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13396996	0.94[ASN][1000 genomes]
rs169925	0.87[CEU][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17863818	1.00[YRI][hapmap]
rs17864744	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs2108806	1.00[CHB][hapmap];0.86[JPT][hapmap];0.94[ASN][1000 genomes]
rs2108807	1.00[CHB][hapmap];0.86[JPT][hapmap];0.96[ASN][1000 genomes]
rs2286433	0.92[CEU][hapmap]
rs2302156	0.91[CEU][hapmap];0.91[EUR][1000 genomes]
rs4497869	1.00[CHB][hapmap];0.86[JPT][hapmap];0.88[ASN][1000 genomes]
rs4663985	1.00[CHB][hapmap];0.86[JPT][hapmap];0.88[ASN][1000 genomes]
rs4663987	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs501145	0.92[CEU][hapmap];0.90[EUR][1000 genomes]
rs503913	0.92[CEU][hapmap]
rs525359	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs528971	0.91[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs531643	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs554699	0.91[CEU][hapmap];0.92[EUR][1000 genomes]
rs556691	0.91[CEU][hapmap];0.91[EUR][1000 genomes]
rs580045	0.91[CEU][hapmap];0.91[EUR][1000 genomes]
rs609942	0.92[CEU][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs619929	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs626110	0.92[CEU][hapmap];0.90[EUR][1000 genomes]
rs637082	0.91[EUR][1000 genomes]
rs638071	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs648818	0.92[CEU][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs650570	0.89[EUR][1000 genomes]
rs650700	0.91[EUR][1000 genomes]
rs654279	0.91[CEU][hapmap];0.91[EUR][1000 genomes]
rs689101	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73118767	0.85[ASN][1000 genomes]
rs735551	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs735552	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs737635	1.00[CHB][hapmap];0.86[JPT][hapmap];0.88[ASN][1000 genomes]
rs887062	0.91[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013712	chr2:234558457-235495825	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv532476	chr2:234595695-235134381	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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