Variant report

Variant	rs7571102
Chromosome Location	chr2:141331723-141331724
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10179908	0.92[CEU][hapmap];0.90[CHB][hapmap];0.85[JPT][hapmap]
rs10496849	0.91[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap]
rs13006464	0.91[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap]
rs13013854	0.91[CEU][hapmap];0.89[CHB][hapmap];0.84[JPT][hapmap];0.85[YRI][hapmap]
rs6751750	0.83[EUR][1000 genomes]
rs7587396	0.92[CEU][hapmap];0.90[CHB][hapmap];0.84[JPT][hapmap];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7598849	0.91[CEU][hapmap];0.83[CHB][hapmap];0.84[JPT][hapmap];0.85[YRI][hapmap];0.85[EUR][1000 genomes]
rs9287536	0.87[CEU][hapmap];0.89[CHB][hapmap];0.84[JPT][hapmap];0.85[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv583192	chr2:141310721-141350100	Enhancers Weak transcription	Chromatin interactive region miRNA	n/a	inside rSNPs	n/a
2	nsv459529	chr2:141321160-141350100	Enhancers Weak transcription	Chromatin interactive region miRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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