Variant report

Variant	rs13013854
Chromosome Location	chr2:141298674-141298675
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10179908	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs10496849	0.81[ASW][hapmap];1.00[CEU][hapmap];0.91[CHB][hapmap];0.97[CHD][hapmap];0.90[JPT][hapmap];0.83[MEX][hapmap];0.87[TSI][hapmap];0.83[YRI][hapmap]
rs11688310	0.83[MEX][hapmap]
rs11693520	0.96[MEX][hapmap]
rs13003116	0.84[MEX][hapmap]
rs13006464	0.89[ASW][hapmap];1.00[CEU][hapmap];0.91[CHB][hapmap];0.97[CHD][hapmap];0.90[JPT][hapmap];0.83[MEX][hapmap];0.87[TSI][hapmap];0.83[YRI][hapmap]
rs1385768	0.87[MEX][hapmap]
rs1463616	0.87[MEX][hapmap]
rs1485848	0.83[MEX][hapmap]
rs1905925	0.87[MEX][hapmap]
rs3828941	0.82[AMR][1000 genomes]
rs6430913	0.87[MEX][hapmap]
rs6430920	0.87[MEX][hapmap];0.81[TSI][hapmap]
rs6430921	0.87[MEX][hapmap];0.81[TSI][hapmap]
rs6751750	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7571102	0.91[CEU][hapmap];0.89[CHB][hapmap];0.84[JPT][hapmap];0.85[YRI][hapmap]
rs7587396	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7598849	0.89[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.95[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9287536	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.96[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv962117	chr2:141296712-141299620	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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