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Variant report
Variant
rs7575460
Chromosome Location
chr2:141286140-141286141
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
No data
No data
No data
No data
No data
Extended variants information (count: 13 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:13)
rs_ID
r
2
[population]
rs13000194
1.00[CEU][hapmap]
rs13032617
0.91[MEX][hapmap]
rs1352041
0.89[CEU][hapmap]
rs1352042
0.94[CEU][hapmap]
rs1352046
0.95[CEU][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap]
rs1385769
0.95[CEU][hapmap];0.84[MEX][hapmap];0.92[TSI][hapmap]
rs1385770
0.95[CEU][hapmap];0.84[MEX][hapmap];0.92[TSI][hapmap]
rs1518440
0.83[MEX][hapmap]
rs17387292
0.83[MEX][hapmap]
rs17387536
0.83[MEX][hapmap]
rs6430903
0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6715219
1.00[CEU][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.85[YRI][hapmap]
rs7422845
0.82[MEX][hapmap]
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
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