Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11126419	0.87[MEX][hapmap]
rs11890369	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs11892479	0.87[ASN][1000 genomes]
rs12105840	0.84[ASN][1000 genomes]
rs17009396	1.00[GIH][hapmap]
rs3813233	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs3813234	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6705766	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.94[ASN][1000 genomes]
rs6714724	0.85[ASN][1000 genomes]
rs6744169	0.94[ASN][1000 genomes]
rs6747730	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs6756768	0.85[ASN][1000 genomes]
rs72917443	0.94[ASN][1000 genomes]
rs72917445	0.94[ASN][1000 genomes]
rs72917450	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73948041	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7565869	0.90[ASN][1000 genomes]
rs7600291	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7600452	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7607601	0.91[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7581248	DYSF	cis	parietal	SCAN

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:74115000-74119600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr2:74115000-74123600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr2:74117200-74121400	Weak transcription	Gastric	stomach
4	chr2:74117600-74119600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr2:74117600-74120200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr2:74117800-74119600	Enhancers	Fetal Stomach	stomach
7	chr2:74118000-74120400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr2:74118200-74123400	Weak transcription	Brain Hippocampus Middle	brain
9	chr2:74118200-74123600	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr2:74118400-74119800	Flanking Active TSS	Stomach Smooth Muscle	stomach
11	chr2:74118600-74120200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr2:74118600-74120200	Weak transcription	Lung	lung
13	chr2:74118600-74128400	Weak transcription	HMEC	breast
14	chr2:74118800-74119600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr2:74119200-74119600	Enhancers	NHLF	lung
16	chr2:74119400-74119600	Flanking Active TSS	Rectal Smooth Muscle	rectum
17	chr2:74119400-74119800	Flanking Active TSS	Colon Smooth Muscle	Colon
18	chr2:74119400-74120000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
19	chr2:74119400-74120200	Enhancers	Placenta	Placenta
20	chr2:74119400-74124600	Active TSS	Duodenum Smooth Muscle	Duodenum

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