Variant report

Variant	rs7607601
Chromosome Location	chr2:74119340-74119341
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11890369	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11892479	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11897051	0.90[EUR][1000 genomes]
rs12105840	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13414927	0.90[EUR][1000 genomes]
rs13418993	0.90[EUR][1000 genomes]
rs13419314	0.90[EUR][1000 genomes]
rs13432600	0.90[EUR][1000 genomes]
rs3738845	0.90[EUR][1000 genomes]
rs3813233	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3813234	0.97[ASN][1000 genomes]
rs56875063	0.93[EUR][1000 genomes]
rs60987687	0.87[EUR][1000 genomes]
rs6705766	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6714724	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6744169	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6747730	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6756768	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72917409	0.90[EUR][1000 genomes]
rs72917413	0.90[EUR][1000 genomes]
rs72917415	0.90[EUR][1000 genomes]
rs72917417	0.90[EUR][1000 genomes]
rs72917422	0.90[EUR][1000 genomes]
rs72917443	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72917445	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72917450	0.97[ASN][1000 genomes]
rs73948041	0.97[ASN][1000 genomes]
rs7565869	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7579755	0.90[EUR][1000 genomes]
rs7581248	0.91[ASN][1000 genomes]
rs7600291	0.97[ASN][1000 genomes]
rs7600452	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:74115000-74119600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr2:74115000-74123600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr2:74116600-74119400	Enhancers	Rectal Smooth Muscle	rectum
4	chr2:74116800-74119400	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr2:74117200-74121400	Weak transcription	Gastric	stomach
6	chr2:74117600-74119600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr2:74117600-74120200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr2:74117800-74119600	Enhancers	Fetal Stomach	stomach
9	chr2:74118000-74120400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr2:74118200-74123400	Weak transcription	Brain Hippocampus Middle	brain
11	chr2:74118200-74123600	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr2:74118400-74119800	Flanking Active TSS	Stomach Smooth Muscle	stomach
13	chr2:74118600-74120200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr2:74118600-74120200	Weak transcription	Lung	lung
15	chr2:74118600-74128400	Weak transcription	HMEC	breast
16	chr2:74118800-74119600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr2:74119000-74119400	Enhancers	Colon Smooth Muscle	Colon
18	chr2:74119200-74119600	Enhancers	NHLF	lung

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