Variant report

Variant	rs13419314
Chromosome Location	chr2:74102669-74102670
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:74097431..74099380-chr2:74100945..74102785,2	K562	blood:
2	chr2:74097880..74100787-chr2:74100945..74103812,3	K562	blood:

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10167667	1.00[ASN][1000 genomes]
rs10202343	1.00[ASN][1000 genomes]
rs1055888	0.94[ASN][1000 genomes]
rs11126419	0.97[ASN][1000 genomes]
rs11890369	0.90[EUR][1000 genomes]
rs11892479	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11897051	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12105840	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12614068	0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12618950	0.91[ASN][1000 genomes]
rs12623504	0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs13012471	0.88[ASN][1000 genomes]
rs13414927	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13418993	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13432600	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17009396	0.88[ASN][1000 genomes]
rs17009399	0.88[ASN][1000 genomes]
rs17009404	0.88[ASN][1000 genomes]
rs3738845	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3813230	0.85[ASN][1000 genomes]
rs3813231	0.85[ASN][1000 genomes]
rs3813233	0.90[EUR][1000 genomes]
rs56665235	0.88[ASN][1000 genomes]
rs56875063	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58787134	0.91[ASN][1000 genomes]
rs59974236	0.91[ASN][1000 genomes]
rs60987687	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61314551	0.91[ASN][1000 genomes]
rs6705766	0.87[EUR][1000 genomes]
rs6714724	0.90[EUR][1000 genomes]
rs6744169	0.90[EUR][1000 genomes]
rs6747730	0.90[EUR][1000 genomes]
rs6756768	0.90[EUR][1000 genomes]
rs72915479	0.88[ASN][1000 genomes]
rs72917405	0.94[ASN][1000 genomes]
rs72917409	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72917413	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72917415	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72917417	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72917422	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72917443	0.90[EUR][1000 genomes]
rs72917445	0.90[EUR][1000 genomes]
rs7565869	0.90[EUR][1000 genomes]
rs7572565	0.88[ASN][1000 genomes]
rs7579755	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7592693	0.88[ASN][1000 genomes]
rs7600452	0.90[EUR][1000 genomes]
rs7607601	0.90[EUR][1000 genomes]
rs7609273	0.91[ASN][1000 genomes]
rs919629	0.91[ASN][1000 genomes]

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:74092800-74104600	Weak transcription	Hela-S3	cervix
2	chr2:74094200-74103400	Weak transcription	Fetal Thymus	thymus
3	chr2:74094200-74104000	Weak transcription	NHEK	skin
4	chr2:74094200-74104200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr2:74094200-74104400	Weak transcription	K562	blood
6	chr2:74094200-74104600	Weak transcription	Duodenum Mucosa	Duodenum
7	chr2:74094400-74103000	Weak transcription	Primary B cells from peripheral blood	blood
8	chr2:74094400-74103800	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr2:74094400-74104000	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr2:74094400-74104200	Weak transcription	Primary neutrophils fromperipheralblood	blood
11	chr2:74094400-74104600	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr2:74094800-74104600	Weak transcription	GM12878-XiMat	blood
13	chr2:74097600-74114600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr2:74097800-74104200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr2:74098000-74103200	Weak transcription	Placenta	Placenta
16	chr2:74098000-74104000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr2:74098000-74104200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr2:74098000-74104600	Weak transcription	Rectal Mucosa Donor 31	rectum
19	chr2:74098400-74104200	Weak transcription	Fetal Muscle Leg	muscle
20	chr2:74099800-74103400	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr2:74099800-74104000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr2:74100000-74104200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr2:74100400-74103200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr2:74100600-74104800	Weak transcription	Adipose Nuclei	Adipose
25	chr2:74101000-74104000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr2:74101400-74102800	Weak transcription	Rectal Smooth Muscle	rectum
27	chr2:74101400-74103800	Weak transcription	Stomach Smooth Muscle	stomach
28	chr2:74101600-74104200	Enhancers	Colon Smooth Muscle	Colon
29	chr2:74101800-74103000	Enhancers	HepG2	liver

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