Variant report

Variant	rs7579755
Chromosome Location	chr2:74101208-74101209
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:74097431..74099380-chr2:74100945..74102785,2	K562	blood:
2	chr2:74097880..74100787-chr2:74100945..74103812,3	K562	blood:

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10167667	1.00[ASN][1000 genomes]
rs10202343	1.00[ASN][1000 genomes]
rs1055888	0.94[ASN][1000 genomes]
rs11126419	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs11890369	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs11892479	0.93[EUR][1000 genomes]
rs11897051	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12105840	0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12614068	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs12618950	0.91[ASN][1000 genomes]
rs12623504	0.91[ASN][1000 genomes]
rs13012471	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs13414927	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13418993	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13419314	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13432600	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17009396	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs17009399	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs17009404	1.00[CHB][hapmap];0.82[JPT][hapmap];0.88[ASN][1000 genomes]
rs3738845	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3813230	0.85[ASN][1000 genomes]
rs3813231	0.85[ASN][1000 genomes]
rs3813233	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs56665235	0.88[ASN][1000 genomes]
rs56875063	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58787134	0.91[ASN][1000 genomes]
rs59974236	0.91[ASN][1000 genomes]
rs60987687	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61314551	0.91[ASN][1000 genomes]
rs6705766	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs6714724	0.90[EUR][1000 genomes]
rs6744169	0.90[EUR][1000 genomes]
rs6747730	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs6756768	0.90[EUR][1000 genomes]
rs72915479	0.88[ASN][1000 genomes]
rs72917405	0.94[ASN][1000 genomes]
rs72917409	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72917413	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72917415	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72917417	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72917422	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72917443	0.90[EUR][1000 genomes]
rs72917445	0.90[EUR][1000 genomes]
rs7565869	0.90[EUR][1000 genomes]
rs7572565	0.88[ASN][1000 genomes]
rs7592693	0.88[ASN][1000 genomes]
rs7600452	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs7607601	0.90[EUR][1000 genomes]
rs7609273	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs919629	0.91[ASN][1000 genomes]

No data

Chromatin state (count:47 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:74092000-74101800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr2:74092800-74104600	Weak transcription	Hela-S3	cervix
3	chr2:74093400-74102200	Weak transcription	Psoas Muscle	Psoas
4	chr2:74093800-74101800	Weak transcription	HepG2	liver
5	chr2:74094000-74102000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr2:74094200-74101400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr2:74094200-74101400	Weak transcription	Lung	lung
8	chr2:74094200-74101600	Weak transcription	Primary B cells from cord blood	blood
9	chr2:74094200-74101600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr2:74094200-74103400	Weak transcription	Fetal Thymus	thymus
11	chr2:74094200-74104000	Weak transcription	NHEK	skin
12	chr2:74094200-74104200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr2:74094200-74104400	Weak transcription	K562	blood
14	chr2:74094200-74104600	Weak transcription	Duodenum Mucosa	Duodenum
15	chr2:74094400-74103000	Weak transcription	Primary B cells from peripheral blood	blood
16	chr2:74094400-74103800	Weak transcription	Monocytes-CD14+_RO01746	blood
17	chr2:74094400-74104000	Weak transcription	Primary monocytes fromperipheralblood	blood
18	chr2:74094400-74104200	Weak transcription	Primary neutrophils fromperipheralblood	blood
19	chr2:74094400-74104600	Weak transcription	Rectal Mucosa Donor 29	rectum
20	chr2:74094800-74104600	Weak transcription	GM12878-XiMat	blood
21	chr2:74097600-74102600	Weak transcription	Brain Hippocampus Middle	brain
22	chr2:74097600-74114600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr2:74097800-74104200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr2:74098000-74101400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr2:74098000-74101800	Weak transcription	Primary T cells from cord blood	blood
26	chr2:74098000-74101800	Weak transcription	Osteobl	bone
27	chr2:74098000-74102200	Weak transcription	NH-A	brain
28	chr2:74098000-74103200	Weak transcription	Placenta	Placenta
29	chr2:74098000-74104000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr2:74098000-74104200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr2:74098000-74104600	Weak transcription	Rectal Mucosa Donor 31	rectum
32	chr2:74098400-74104200	Weak transcription	Fetal Muscle Leg	muscle
33	chr2:74098600-74102000	Weak transcription	Fetal Stomach	stomach
34	chr2:74099600-74101800	Weak transcription	Brain Cingulate Gyrus	brain
35	chr2:74099800-74101600	Weak transcription	Liver	Liver
36	chr2:74099800-74103400	Weak transcription	Placenta Amnion	Placenta Amnion
37	chr2:74099800-74104000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr2:74100000-74102200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
39	chr2:74100000-74104200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr2:74100400-74101400	Enhancers	Stomach Smooth Muscle	stomach
41	chr2:74100400-74102000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr2:74100400-74102200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr2:74100400-74103200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr2:74100600-74104800	Weak transcription	Adipose Nuclei	Adipose
45	chr2:74100800-74101600	Weak transcription	Colon Smooth Muscle	Colon
46	chr2:74101000-74104000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
47	chr2:74101200-74101400	Enhancers	Rectal Smooth Muscle	rectum

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