Variant report

Variant	rs59974236
Chromosome Location	chr2:74109686-74109687
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:74107424..74109994-chr2:74373553..74377122,3	K562	blood:
2	chr2:74107770..74109994-chr2:74374707..74377122,2	K562	blood:

Variant related genes	Relation type
ENSG00000163170	Chromatin interaction
ENSG00000225439	Chromatin interaction

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs10167667	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10202343	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1055888	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11126419	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11890369	0.82[ASN][1000 genomes]
rs11892479	0.88[ASN][1000 genomes]
rs11897051	0.91[ASN][1000 genomes]
rs12105840	0.91[ASN][1000 genomes]
rs12614068	0.83[ASN][1000 genomes]
rs12618950	0.83[ASN][1000 genomes]
rs12623504	0.83[ASN][1000 genomes]
rs13012471	0.80[ASN][1000 genomes]
rs13414927	0.91[ASN][1000 genomes]
rs13418993	0.91[ASN][1000 genomes]
rs13419314	0.91[ASN][1000 genomes]
rs13432600	0.91[ASN][1000 genomes]
rs17009396	0.85[ASN][1000 genomes]
rs17009399	0.85[ASN][1000 genomes]
rs17009404	0.85[ASN][1000 genomes]
rs3738845	0.94[ASN][1000 genomes]
rs3813233	0.82[ASN][1000 genomes]
rs3813234	0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs56665235	0.85[ASN][1000 genomes]
rs56875063	1.00[ASN][1000 genomes]
rs58787134	0.83[ASN][1000 genomes]
rs60987687	0.91[ASN][1000 genomes]
rs61314551	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6705766	0.82[ASN][1000 genomes]
rs6714724	0.85[ASN][1000 genomes]
rs6744169	0.82[ASN][1000 genomes]
rs6747730	0.82[ASN][1000 genomes]
rs6756768	0.85[ASN][1000 genomes]
rs72915479	0.85[ASN][1000 genomes]
rs72917405	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72917409	0.94[ASN][1000 genomes]
rs72917413	0.94[ASN][1000 genomes]
rs72917415	0.91[ASN][1000 genomes]
rs72917417	0.91[ASN][1000 genomes]
rs72917422	0.91[ASN][1000 genomes]
rs72917443	0.82[ASN][1000 genomes]
rs72917445	0.82[ASN][1000 genomes]
rs72917450	0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73948041	0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7565869	0.85[ASN][1000 genomes]
rs7572565	0.85[ASN][1000 genomes]
rs7579755	0.91[ASN][1000 genomes]
rs7592693	0.85[ASN][1000 genomes]
rs7600291	0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7600452	0.82[ASN][1000 genomes]
rs7609273	0.83[ASN][1000 genomes]
rs919629	0.83[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:74097600-74114600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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