Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:58986174..58988891-chr2:58991936..58994686,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10165014	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10193538	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10204566	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12986742	0.88[ASN][1000 genomes]
rs1613599	0.82[ASN][1000 genomes]
rs2862872	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2862873	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2862874	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6419632	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6545701	0.84[ASN][1000 genomes]
rs6545702	0.83[ASN][1000 genomes]
rs6723486	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6731121	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6748058	0.82[ASN][1000 genomes]
rs6759519	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6759757	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs727856	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs727857	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7596101	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs963537	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431180	chr2:58857542-59178687	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:58989400-58993000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr2:58989800-58995000	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr2:58990200-58995200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr2:58990600-58995000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr2:58991600-58992600	Flanking Active TSS	Primary hematopoietic stem cells	blood
6	chr2:58991600-58993200	Enhancers	H9 Cell Line	embryonic stem cell
7	chr2:58991600-58993200	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr2:58991600-58993200	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr2:58991600-58993400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr2:58991800-58992600	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr2:58992000-58993400	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr2:58992200-58992600	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr2:58992200-58995000	Weak transcription	HUES64 Cell Line	embryonic stem cell
14	chr2:58992400-58993800	Enhancers	Primary hematopoietic stem cells short term culture	blood
15	chr2:58992400-58994800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr2:58992400-58996000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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