Variant report

Variant	rs7652808
Chromosome Location	chr3:85603643-85603644
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 351 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:327)

rs_ID	r²[population]
rs1014796	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.91[ASN][1000 genomes]
rs1030720	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10433499	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10433525	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10511075	0.82[CEU][hapmap];0.90[EUR][1000 genomes]
rs10511076	0.82[CEU][hapmap]
rs10511078	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10511081	0.82[CEU][hapmap]
rs10511083	0.82[CEU][hapmap];0.93[TSI][hapmap];0.89[EUR][1000 genomes]
rs10511085	0.82[CEU][hapmap];0.84[EUR][1000 genomes]
rs10511087	0.89[TSI][hapmap]
rs10865609	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs10865610	0.81[CEU][hapmap];0.93[TSI][hapmap];0.94[EUR][1000 genomes]
rs10865611	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11127893	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs11127896	0.82[CEU][hapmap];0.93[TSI][hapmap]
rs11127897	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11127898	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11127899	0.93[EUR][1000 genomes]
rs11127900	0.92[EUR][1000 genomes]
rs1155666	0.82[EUR][1000 genomes]
rs11714549	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]
rs11919099	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs12054328	1.00[CEU][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12487446	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12491722	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12492753	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12494446	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.95[TSI][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12629607	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12637791	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs12638040	0.92[EUR][1000 genomes]
rs12638798	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.98[TSI][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12639001	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap]
rs12639564	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1368744	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1368750	0.83[EUR][1000 genomes]
rs1375545	0.81[CEU][hapmap]
rs1375550	0.87[EUR][1000 genomes]
rs1375551	0.83[CEU][hapmap]
rs1375554	0.82[CEU][hapmap];0.93[TSI][hapmap];0.93[EUR][1000 genomes]
rs1375555	0.88[CEU][hapmap];0.91[EUR][1000 genomes]
rs1375556	0.91[ASN][1000 genomes]
rs1375557	0.82[CEU][hapmap];0.92[EUR][1000 genomes]
rs1375558	0.92[EUR][1000 genomes]
rs1375560	0.89[EUR][1000 genomes]
rs1375565	0.93[EUR][1000 genomes]
rs1375566	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1433710	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]
rs1433714	0.80[EUR][1000 genomes]
rs1449372	0.82[CEU][hapmap]
rs1449373	0.82[CEU][hapmap]
rs1449378	0.93[EUR][1000 genomes]
rs1449379	0.93[EUR][1000 genomes]
rs1449380	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs1449381	0.93[EUR][1000 genomes]
rs1449382	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs1449386	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.95[TSI][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1449390	0.82[CEU][hapmap]
rs1449391	0.82[CEU][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes]
rs1449401	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1449402	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1449403	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1449405	0.81[CEU][hapmap]
rs1463203	0.93[EUR][1000 genomes]
rs1463204	0.93[EUR][1000 genomes]
rs1463205	0.81[CEU][hapmap];0.93[EUR][1000 genomes]
rs1463206	0.87[CEU][hapmap];0.93[EUR][1000 genomes]
rs1463207	0.93[EUR][1000 genomes]
rs1463208	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs1465716	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]
rs1470635	0.82[CEU][hapmap];0.89[EUR][1000 genomes]
rs1470636	0.88[EUR][1000 genomes]
rs1530738	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs1530739	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs1530740	0.82[CEU][hapmap];0.93[TSI][hapmap];0.93[EUR][1000 genomes]
rs1542248	0.82[CEU][hapmap];0.93[TSI][hapmap];0.83[EUR][1000 genomes]
rs1549979	0.91[TSI][hapmap]
rs1551042	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551043	0.86[EUR][1000 genomes]
rs1551044	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551045	0.93[EUR][1000 genomes]
rs1551046	0.92[EUR][1000 genomes]
rs1551047	0.93[EUR][1000 genomes]
rs1551048	0.93[EUR][1000 genomes]
rs1597315	0.85[CEU][hapmap];0.92[EUR][1000 genomes]
rs17023019	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap]
rs17023032	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17455991	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17456263	0.89[EUR][1000 genomes]
rs17456763	0.82[CEU][hapmap];0.88[TSI][hapmap]
rs17456820	0.81[CEU][hapmap]
rs17457050	0.90[EUR][1000 genomes]
rs17457189	0.91[EUR][1000 genomes]
rs17457217	0.90[EUR][1000 genomes]
rs17457377	0.91[EUR][1000 genomes]
rs17457426	0.91[EUR][1000 genomes]
rs17457454	0.91[EUR][1000 genomes]
rs17457642	0.93[EUR][1000 genomes]
rs17457669	0.93[EUR][1000 genomes]
rs17459563	0.82[CEU][hapmap];0.92[EUR][1000 genomes]
rs17459906	0.93[EUR][1000 genomes]
rs17460541	0.93[EUR][1000 genomes]
rs17460701	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs17515196	0.84[EUR][1000 genomes]
rs17515586	0.87[CEU][hapmap];0.89[EUR][1000 genomes]
rs17516256	0.80[CEU][hapmap]
rs17516284	0.82[CEU][hapmap];0.93[TSI][hapmap]
rs17516346	0.82[CEU][hapmap];0.93[TSI][hapmap]
rs17516470	0.90[EUR][1000 genomes]
rs17516504	0.90[EUR][1000 genomes]
rs17516546	0.88[EUR][1000 genomes]
rs17516580	0.89[EUR][1000 genomes]
rs17516683	0.90[EUR][1000 genomes]
rs17516857	0.91[EUR][1000 genomes]
rs17517080	0.91[EUR][1000 genomes]
rs17517121	0.82[CEU][hapmap];0.93[TSI][hapmap];0.93[EUR][1000 genomes]
rs17517142	0.93[EUR][1000 genomes]
rs17517238	0.93[EUR][1000 genomes]
rs17517273	0.92[EUR][1000 genomes]
rs17518584	0.82[CEU][hapmap];0.93[TSI][hapmap]
rs17519241	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs17519262	0.93[EUR][1000 genomes]
rs17519948	0.93[EUR][1000 genomes]
rs1813696	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs1865252	0.91[TSI][hapmap]
rs1868532	0.82[CEU][hapmap]
rs1868533	0.91[ASN][1000 genomes]
rs1900914	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs1900916	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1900918	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs1947221	0.93[EUR][1000 genomes]
rs1972994	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1992967	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2017293	1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]
rs2029130	0.83[CEU][hapmap];0.93[EUR][1000 genomes]
rs2029132	0.82[CEU][hapmap]
rs2029134	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2033526	0.91[TSI][hapmap]
rs2044723	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2044725	1.00[CEU][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2053108	0.91[TSI][hapmap]
rs2069123	0.82[CEU][hapmap];0.83[EUR][1000 genomes]
rs2077839	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2082556	0.91[TSI][hapmap]
rs2117153	0.91[TSI][hapmap];0.80[EUR][1000 genomes]
rs2122233	0.81[CEU][hapmap];0.93[EUR][1000 genomes]
rs2122234	0.93[EUR][1000 genomes]
rs2122235	0.91[EUR][1000 genomes]
rs2163970	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap]
rs2167043	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes]
rs2167044	0.80[CEU][hapmap];0.93[EUR][1000 genomes]
rs2167045	0.95[CEU][hapmap];0.93[EUR][1000 genomes]
rs2167046	0.90[EUR][1000 genomes]
rs2167047	0.82[CEU][hapmap];0.90[EUR][1000 genomes]
rs2326309	0.91[TSI][hapmap]
rs2326315	0.85[ASN][1000 genomes]
rs2326318	0.93[EUR][1000 genomes]
rs2326319	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2326320	0.82[CEU][hapmap]
rs2326381	0.91[ASN][1000 genomes]
rs28655875	0.91[TSI][hapmap]
rs2875907	1.00[CEU][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap];0.88[EUR][1000 genomes]
rs34305569	0.90[EUR][1000 genomes]
rs34467301	0.85[EUR][1000 genomes]
rs34495106	0.93[EUR][1000 genomes]
rs35438712	0.91[EUR][1000 genomes]
rs35701422	0.88[EUR][1000 genomes]
rs35738543	0.89[EUR][1000 genomes]
rs35827242	0.89[TSI][hapmap]
rs4441668	0.81[CEU][hapmap]
rs4502590	0.81[CEU][hapmap];0.93[EUR][1000 genomes]
rs4508796	0.93[EUR][1000 genomes]
rs4603966	0.93[EUR][1000 genomes]
rs4637303	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4856270	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs4856271	0.82[CEU][hapmap];0.91[EUR][1000 genomes]
rs4856272	0.91[ASN][1000 genomes]
rs4856274	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4856278	1.00[CHB][hapmap];0.97[ASN][1000 genomes]
rs4856568	1.00[JPT][hapmap]
rs4856572	0.91[TSI][hapmap]
rs4856573	0.80[EUR][1000 genomes]
rs4856582	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs4856584	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4856588	0.91[EUR][1000 genomes]
rs4856589	0.92[EUR][1000 genomes]
rs4856590	0.82[CEU][hapmap];0.91[EUR][1000 genomes]
rs4856591	0.81[EUR][1000 genomes]
rs4856592	0.93[EUR][1000 genomes]
rs4856596	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs4856598	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55753638	0.91[ASN][1000 genomes]
rs55801641	0.90[EUR][1000 genomes]
rs56779213	0.90[EUR][1000 genomes]
rs56816351	0.81[EUR][1000 genomes]
rs57276248	0.93[EUR][1000 genomes]
rs57756567	0.90[EUR][1000 genomes]
rs58796643	0.88[EUR][1000 genomes]
rs58828944	0.89[EUR][1000 genomes]
rs58889493	0.93[EUR][1000 genomes]
rs58919842	0.90[EUR][1000 genomes]
rs59073108	0.93[EUR][1000 genomes]
rs59211082	0.93[EUR][1000 genomes]
rs59225869	0.89[EUR][1000 genomes]
rs59491876	0.90[EUR][1000 genomes]
rs59770976	0.90[EUR][1000 genomes]
rs59825726	0.89[EUR][1000 genomes]
rs59835020	0.93[EUR][1000 genomes]
rs59967234	0.89[EUR][1000 genomes]
rs60541362	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60597959	0.87[EUR][1000 genomes]
rs61316596	0.93[EUR][1000 genomes]
rs61586601	0.91[EUR][1000 genomes]
rs62250467	0.92[EUR][1000 genomes]
rs62250468	0.93[EUR][1000 genomes]
rs62250472	0.93[EUR][1000 genomes]
rs62250491	0.93[EUR][1000 genomes]
rs62250492	0.93[EUR][1000 genomes]
rs62250496	0.92[EUR][1000 genomes]
rs62250500	0.92[EUR][1000 genomes]
rs62250501	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62250502	0.89[EUR][1000 genomes]
rs62250503	0.92[EUR][1000 genomes]
rs62250537	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62250540	0.92[EUR][1000 genomes]
rs62250711	0.80[EUR][1000 genomes]
rs62250713	0.84[EUR][1000 genomes]
rs62250714	0.83[EUR][1000 genomes]
rs62250715	0.83[EUR][1000 genomes]
rs62250719	0.83[EUR][1000 genomes]
rs62250750	0.87[EUR][1000 genomes]
rs62250754	0.87[EUR][1000 genomes]
rs62250758	0.88[EUR][1000 genomes]
rs62252462	0.89[EUR][1000 genomes]
rs62252463	0.89[EUR][1000 genomes]
rs62252464	0.88[EUR][1000 genomes]
rs62252465	0.88[EUR][1000 genomes]
rs62252466	0.89[EUR][1000 genomes]
rs62252467	0.88[EUR][1000 genomes]
rs62252512	0.90[EUR][1000 genomes]
rs62252513	0.91[EUR][1000 genomes]
rs62252516	0.91[EUR][1000 genomes]
rs62252517	0.91[ASN][1000 genomes]
rs62252518	0.91[EUR][1000 genomes]
rs62252519	0.91[EUR][1000 genomes]
rs62253961	0.87[EUR][1000 genomes]
rs62253964	0.93[EUR][1000 genomes]
rs62253965	0.93[EUR][1000 genomes]
rs62263910	0.92[EUR][1000 genomes]
rs62263912	0.93[EUR][1000 genomes]
rs6549030	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6549031	0.91[ASN][1000 genomes]
rs6549036	0.82[CEU][hapmap]
rs6549039	0.81[CEU][hapmap]
rs6549040	0.81[CEU][hapmap]
rs6549041	0.82[CEU][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes]
rs6549042	0.92[EUR][1000 genomes]
rs6549043	0.82[CEU][hapmap];0.92[EUR][1000 genomes]
rs6549044	0.92[EUR][1000 genomes]
rs66625173	0.90[EUR][1000 genomes]
rs66781790	0.87[EUR][1000 genomes]
rs66922686	0.93[EUR][1000 genomes]
rs67336646	0.84[EUR][1000 genomes]
rs67544605	0.90[EUR][1000 genomes]
rs6762267	0.80[EUR][1000 genomes]
rs6762535	0.82[CEU][hapmap];0.92[EUR][1000 genomes]
rs6762733	0.82[CEU][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes]
rs6765881	0.93[EUR][1000 genomes]
rs6765991	0.93[EUR][1000 genomes]
rs6766493	0.91[EUR][1000 genomes]
rs6766690	0.81[CEU][hapmap];0.93[EUR][1000 genomes]
rs6772956	0.92[EUR][1000 genomes]
rs6774985	0.80[EUR][1000 genomes]
rs6777456	0.92[EUR][1000 genomes]
rs6777458	0.92[EUR][1000 genomes]
rs6778223	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.91[ASN][1000 genomes]
rs6779501	0.91[EUR][1000 genomes]
rs6780346	0.88[EUR][1000 genomes]
rs6781515	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs6782190	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6788098	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs6790090	0.80[CEU][hapmap];0.93[EUR][1000 genomes]
rs67904150	0.93[EUR][1000 genomes]
rs6790699	0.81[CEU][hapmap];0.92[EUR][1000 genomes]
rs6794866	0.81[CEU][hapmap];0.93[EUR][1000 genomes]
rs67955391	0.93[EUR][1000 genomes]
rs68001049	0.93[EUR][1000 genomes]
rs6801823	0.88[CEU][hapmap];0.93[EUR][1000 genomes]
rs6804626	0.88[EUR][1000 genomes]
rs6804845	0.82[CEU][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes]
rs6807461	0.91[ASN][1000 genomes]
rs6807666	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6810225	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs72615727	0.91[EUR][1000 genomes]
rs72615728	0.91[EUR][1000 genomes]
rs726610	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73137879	0.84[EUR][1000 genomes]
rs7427346	0.89[EUR][1000 genomes]
rs7609594	0.91[TSI][hapmap]
rs7614148	0.82[CEU][hapmap];0.83[EUR][1000 genomes]
rs7614552	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7616458	0.88[CEU][hapmap];0.93[EUR][1000 genomes]
rs7617323	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7617356	0.82[CEU][hapmap];0.93[TSI][hapmap];0.93[EUR][1000 genomes]
rs7618124	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7618429	0.81[CEU][hapmap];0.87[EUR][1000 genomes]
rs7618494	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7620313	0.82[CEU][hapmap];0.93[EUR][1000 genomes]
rs7621381	0.83[EUR][1000 genomes]
rs7623474	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.91[ASN][1000 genomes]
rs7623947	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7634761	0.82[CEU][hapmap];0.92[EUR][1000 genomes]
rs7640828	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7647981	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7651113	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7653790	0.80[CEU][hapmap]
rs892365	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]
rs9309978	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]
rs956281	0.93[EUR][1000 genomes]
rs9824071	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.81[YRI][hapmap]
rs9824840	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9825345	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]
rs9833972	1.00[JPT][hapmap];0.81[YRI][hapmap]
rs9846153	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]
rs993136	0.91[TSI][hapmap]
rs993137	0.91[TSI][hapmap]
rs9990095	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:24 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3419993	chr3:85030343-85663403	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
2	esv2753915	chr3:85071410-85624810	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1002238	chr3:85357855-85719373	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	1 gene(s)	inside rSNPs	diseases
4	nsv536619	chr3:85357855-85719373	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	1 gene(s)	inside rSNPs	diseases
5	nsv590905	chr3:85438564-85797093	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv998829	chr3:85449960-85641099	Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv536622	chr3:85449960-85641099	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv526621	chr3:85470642-85667683	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv1009927	chr3:85497666-85669155	Weak transcription Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv1010541	chr3:85505839-85870597	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
11	nsv536625	chr3:85505839-85870597	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
12	nsv1002139	chr3:85534559-85630146	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv1006433	chr3:85535783-85631667	Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv590906	chr3:85539816-85626054	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv1008269	chr3:85544536-85617198	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
16	nsv536627	chr3:85544536-85617198	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
17	nsv527642	chr3:85551353-85619451	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
18	nsv1007503	chr3:85558527-85617198	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
19	nsv1013950	chr3:85561009-85631527	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
20	nsv536628	chr3:85561009-85631527	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
21	nsv1006141	chr3:85577197-85619079	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
22	nsv1006360	chr3:85597755-85683081	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
23	nsv536629	chr3:85597755-85683081	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
24	nsv1011376	chr3:85599411-85657771	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs7652808	CADM2	cis	lymphoblastoid	seeQTL
rs7652808	PTCD2	trans	cerebellum	SCAN
rs7652808	IGSF4D	cis	multi-tissue	Pritchard

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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