Variant report

Variant	rs7656015
Chromosome Location	chr4:148162962-148162963
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10014781	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10019007	0.91[AFR][1000 genomes]
rs10021391	0.85[AFR][1000 genomes]
rs10022493	0.91[AFR][1000 genomes]
rs10028362	0.82[AFR][1000 genomes]
rs1005771	0.89[CHB][hapmap]
rs11100946	0.85[AFR][1000 genomes]
rs11100947	0.85[AFR][1000 genomes]
rs13104597	0.91[AFR][1000 genomes]
rs13115689	0.85[AFR][1000 genomes]
rs1354886	0.91[AFR][1000 genomes]
rs1395817	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1948969	0.81[CHB][hapmap];0.94[AFR][1000 genomes]
rs2202701	0.91[AFR][1000 genomes]
rs2221601	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2357615	0.85[AFR][1000 genomes]
rs2357616	0.85[AFR][1000 genomes]
rs2562857	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2714894	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2714895	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2714899	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2953289	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4339188	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4835385	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56666042	0.84[ASN][1000 genomes]
rs58585596	0.89[ASN][1000 genomes]
rs6537464	0.82[AFR][1000 genomes]
rs6537465	0.82[AFR][1000 genomes]
rs6822622	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6829397	0.82[AFR][1000 genomes]
rs6832238	0.94[AFR][1000 genomes]
rs6842606	0.82[AFR][1000 genomes]
rs73853376	0.83[ASN][1000 genomes]
rs73853384	0.89[ASN][1000 genomes]
rs73853385	0.93[ASN][1000 genomes]
rs934144	0.82[AFR][1000 genomes]
rs952688	0.82[ASN][1000 genomes]
rs9991498	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024629	chr4:147987351-148277008	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	3 gene(s)	inside rSNPs	diseases
2	nsv830108	chr4:148114652-148311104	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:148160600-148165000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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