Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:81624160..81627209-chr4:81627794..81630276,3	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1038530	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1038531	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12650380	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1352077	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1486021	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1486027	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1486030	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2867782	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs329402	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs329403	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs396273	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4146323	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs436807	0.82[EUR][1000 genomes]
rs444023	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs444680	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4693062	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4693510	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4693531	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs544526	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72864881	0.92[EUR][1000 genomes]
rs72864895	0.82[EUR][1000 genomes]
rs72879935	0.90[EUR][1000 genomes]
rs73829109	0.83[EUR][1000 genomes]
rs7675185	0.90[EUR][1000 genomes]
rs7696162	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs923178	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs971728	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002776	chr4:81480374-81802614	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv537154	chr4:81480374-81802614	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv3518601	chr4:81523238-81831941	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv3518602	chr4:81523354-81831976	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81622800-81625200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr4:81624400-81625200	Enhancers	Rectal Smooth Muscle	rectum
3	chr4:81624600-81625000	Enhancers	Colon Smooth Muscle	Colon
4	chr4:81624600-81630600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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