Variant report

Variant	rs7695256
Chromosome Location	chr4:85219864-85219865
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11932874	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11945202	0.83[AMR][1000 genomes]
rs17008878	0.82[ASN][1000 genomes]
rs1967139	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28375928	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6535533	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6825060	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6857631	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6858150	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72955986	0.94[ASN][1000 genomes]
rs72955991	0.94[ASN][1000 genomes]
rs72961914	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7654197	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7660492	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879514	chr4:85057124-85272572	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv1001364	chr4:85193054-85252321	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv998617	chr4:85193054-85255409	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:85219200-85220000	Active TSS	A549	lung
2	chr4:85219200-85220200	Active TSS	HUES6 Cell Line	embryonic stem cell
3	chr4:85219200-85220200	Active TSS	K562	blood
4	chr4:85219600-85220000	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
5	chr4:85219600-85220000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
6	chr4:85219600-85220200	Active TSS	iPS-18 Cell Line	embryonic stem cell
7	chr4:85219600-85220200	Active TSS	Rectal Mucosa Donor 29	rectum
8	chr4:85219800-85220000	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr4:85219800-85220200	Active TSS	HUES64 Cell Line	embryonic stem cell
10	chr4:85219800-85220200	Active TSS	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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