Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10021127	1.00[EUR][1000 genomes]
rs11932874	0.94[ASN][1000 genomes]
rs1495144	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17008673	1.00[EUR][1000 genomes]
rs17008681	1.00[EUR][1000 genomes]
rs1967139	0.94[ASN][1000 genomes]
rs2083665	1.00[AMR][1000 genomes]
rs2119793	1.00[AMR][1000 genomes]
rs28372645	1.00[EUR][1000 genomes]
rs28375928	0.94[ASN][1000 genomes]
rs28451675	1.00[EUR][1000 genomes]
rs28532917	1.00[EUR][1000 genomes]
rs28718327	1.00[EUR][1000 genomes]
rs28727985	0.85[AMR][1000 genomes]
rs6535533	0.82[ASN][1000 genomes]
rs6816368	1.00[EUR][1000 genomes]
rs6825060	0.94[ASN][1000 genomes]
rs6826424	1.00[AMR][1000 genomes]
rs6828383	1.00[AMR][1000 genomes]
rs6831720	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6858150	0.94[ASN][1000 genomes]
rs72955986	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72961932	1.00[EUR][1000 genomes]
rs72962002	1.00[EUR][1000 genomes]
rs7654197	0.82[ASN][1000 genomes]
rs7660492	0.82[ASN][1000 genomes]
rs7668554	1.00[AMR][1000 genomes]
rs7668852	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7695256	0.94[ASN][1000 genomes]
rs7699309	1.00[EUR][1000 genomes]
rs9990978	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879514	chr4:85057124-85272572	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv1001364	chr4:85193054-85252321	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv998617	chr4:85193054-85255409	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:85215000-85219600	Weak transcription	Rectal Mucosa Donor 29	rectum

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