Variant report

Variant	rs7698116
Chromosome Location	chr4:150903363-150903364
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:150900710..150903674-chr4:150904069..150906579,3	K562	blood:

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10004846	1.00[AMR][1000 genomes]
rs10005584	1.00[AMR][1000 genomes]
rs10010230	1.00[AMR][1000 genomes]
rs10017930	1.00[AMR][1000 genomes]
rs10020062	1.00[AMR][1000 genomes]
rs10027651	1.00[AMR][1000 genomes]
rs10027751	1.00[AMR][1000 genomes]
rs10028697	1.00[AMR][1000 genomes]
rs10034848	1.00[AMR][1000 genomes]
rs17026536	1.00[AMR][1000 genomes]
rs17026554	1.00[AMR][1000 genomes]
rs28444418	1.00[AMR][1000 genomes]
rs28480105	1.00[AMR][1000 genomes]
rs28485405	1.00[AMR][1000 genomes]
rs28499214	1.00[AMR][1000 genomes]
rs28504685	1.00[AMR][1000 genomes]
rs28515804	1.00[AMR][1000 genomes]
rs28550278	1.00[AMR][1000 genomes]
rs28556283	1.00[AMR][1000 genomes]
rs28661715	1.00[AMR][1000 genomes]
rs28670248	1.00[AMR][1000 genomes]
rs28723057	1.00[AMR][1000 genomes]
rs6839583	1.00[AMR][1000 genomes]
rs73860533	1.00[AMR][1000 genomes]
rs73860536	1.00[AMR][1000 genomes]
rs73860928	1.00[AMR][1000 genomes]
rs7681080	1.00[AMR][1000 genomes]
rs9992316	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026797	chr4:150246932-151217137	Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1016169	chr4:150670127-150903827	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv537299	chr4:150670127-150903827	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv932022	chr4:150831733-151419552	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
5	nsv830111	chr4:150867357-151035556	Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
6	nsv530158	chr4:150877557-151040992	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
7	esv1006678	chr4:150901108-150907557	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:150900800-150903800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr4:150902400-150903600	Weak transcription	NHDF-Ad	bronchial
3	chr4:150902600-150907800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr4:150902800-150908000	Weak transcription	Fetal Kidney	kidney
5	chr4:150903000-150903400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr4:150903000-150904400	Weak transcription	Colon Smooth Muscle	Colon

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