Variant report

Variant rs7725001
Chromosome Location chr5:53992778-53992779
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:53986800-53992800 Weak transcription HSMMtube muscle
2 chr5:53987400-53999600 Weak transcription Pancreas Pancrea
3 chr5:53987600-53997800 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr5:53988400-53995200 Enhancers Fetal Lung lung
5 chr5:53989800-53993000 Enhancers Brain Substantia Nigra brain
6 chr5:53989800-53995000 Enhancers Fetal Stomach stomach
7 chr5:53990000-53993200 Enhancers Brain Cingulate Gyrus brain
8 chr5:53990000-53999000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr5:53990400-53992800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr5:53990600-53992800 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr5:53990600-53994000 Weak transcription Fetal Heart heart
12 chr5:53990600-53994800 Weak transcription Left Ventricle heart
13 chr5:53990600-53999000 Weak transcription Right Ventricle heart
14 chr5:53990800-53998800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr5:53991200-53995000 Weak transcription NHLF lung
16 chr5:53991400-53993000 Enhancers Aorta Aorta
17 chr5:53991400-53994000 Enhancers Stomach Smooth Muscle stomach
18 chr5:53991600-53992800 Enhancers Adipose Nuclei Adipose
19 chr5:53991600-53993000 Enhancers Ovary ovary
20 chr5:53991600-53993000 Enhancers NHDF-Ad bronchial
21 chr5:53991600-53993400 Enhancers Fetal Muscle Leg muscle
22 chr5:53991800-53993000 Enhancers Duodenum Smooth Muscle Duodenum
23 chr5:53992000-53993000 Enhancers Fetal Muscle Trunk muscle
24 chr5:53992000-53993200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr5:53992000-53993200 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr5:53992000-53993200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
27 chr5:53992000-53993400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr5:53992000-53994000 Enhancers Fetal Brain Male brain
29 chr5:53992000-53994000 Enhancers Rectal Smooth Muscle rectum
30 chr5:53992200-53993800 Enhancers Colon Smooth Muscle Colon
31 chr5:53992200-53993800 Weak transcription Lung lung
32 chr5:53992200-53994400 Weak transcription Brain Anterior Caudate brain
33 chr5:53992200-53994800 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr5:53992400-53992800 Weak transcription Right Atrium heart
35 chr5:53992400-53994000 Enhancers Brain Germinal Matrix brain
36 chr5:53992600-53993000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr5:53992600-53993000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr5:53992600-53993000 Enhancers Placenta Placenta
39 chr5:53992600-53993000 Enhancers Osteobl bone
40 chr5:53992600-53993200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr5:53992600-53993200 Enhancers Fetal Brain Female brain
42 chr5:53992600-53993200 Enhancers Skeletal Muscle Male skeletal muscle
43 chr5:53992600-53998400 Weak transcription Brain Hippocampus Middle brain

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