Variant report
| Variant | rs772699 |
|---|---|
| Chromosome Location | chr12:56326066-56326067 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56319800-56326600 | Active TSS | Thymus | Thymus |
| 2 | chr12:56321200-56327600 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 3 | chr12:56321600-56327000 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 4 | chr12:56321800-56327200 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
| 5 | chr12:56324000-56326600 | Active TSS | Primary T killer naive cells fromperipheralblood | blood |
| 6 | chr12:56324000-56326600 | Active TSS | Primary T killer memory cells from peripheral blood | blood |
| 7 | chr12:56324000-56327000 | Active TSS | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 8 | chr12:56324200-56326400 | Active TSS | Primary T cells from cord blood | blood |
| 9 | chr12:56324200-56327400 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 10 | chr12:56324400-56327000 | Flanking Active TSS | Primary mononuclear cells fromperipheralblood | Blood |
| 11 | chr12:56324600-56326400 | Active TSS | Fetal Thymus | thymus |
| 12 | chr12:56324800-56326400 | Active TSS | Primary T helper naive cells from peripheral blood | blood |
| 13 | chr12:56325000-56326200 | Active TSS | Primary T cells fromperipheralblood | blood |
| 14 | chr12:56325000-56326400 | Transcr. at gene 5' and 3' | Primary T helper 17 cells PMA-I stimulated | -- |
| 15 | chr12:56325000-56326600 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 16 | chr12:56325000-56327400 | Active TSS | Esophagus | oesophagus |
| 17 | chr12:56325000-56330200 | Transcr. at gene 5' and 3' | Primary T helper naive cells fromperipheralblood | blood |
| 18 | chr12:56325200-56326200 | Active TSS | Fetal Kidney | kidney |
| 19 | chr12:56325200-56326400 | Active TSS | Primary T helper memory cells from peripheral blood 1 | blood |
| 20 | chr12:56325200-56326400 | Active TSS | Duodenum Smooth Muscle | Duodenum |
| 21 | chr12:56325200-56326400 | Active TSS | NHEK | skin |
| 22 | chr12:56325200-56326600 | Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 23 | chr12:56325200-56326600 | Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 24 | chr12:56325200-56326800 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
| 25 | chr12:56325200-56326800 | Active TSS | Aorta | Aorta |
| 26 | chr12:56325200-56326800 | Active TSS | Sigmoid Colon | Sigmoid Colon |
| 27 | chr12:56325200-56327000 | Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 28 | chr12:56325400-56326200 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
| 29 | chr12:56325400-56326200 | Active TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 30 | chr12:56325400-56326200 | Bivalent/Poised TSS | HUES64 Cell Line | embryonic stem cell |
| 31 | chr12:56325400-56326200 | Active TSS | Brain Anterior Caudate | brain |
| 32 | chr12:56325400-56326200 | Active TSS | Brain Hippocampus Middle | brain |
| 33 | chr12:56325400-56326200 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 34 | chr12:56325400-56326200 | Active TSS | Fetal Lung | lung |
| 35 | chr12:56325400-56326200 | Active TSS | Psoas Muscle | Psoas |
| 36 | chr12:56325400-56326200 | Active TSS | Right Atrium | heart |
| 37 | chr12:56325400-56326200 | Bivalent/Poised TSS | HepG2 | liver |
| 38 | chr12:56325400-56326200 | Active TSS | HSMM | muscle |
| 39 | chr12:56325400-56326200 | Active TSS | HSMMtube | muscle |
| 40 | chr12:56325400-56326400 | Active TSS | H9 Cell Line | embryonic stem cell |
| 41 | chr12:56325400-56326400 | Active TSS | ES-UCSF4 Cell Line | embryonic stem cell |
| 42 | chr12:56325400-56326400 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 43 | chr12:56325400-56326400 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 44 | chr12:56325400-56326400 | Active TSS | Duodenum Mucosa | Duodenum |
| 45 | chr12:56325400-56326400 | Active TSS | Gastric | stomach |
| 46 | chr12:56325400-56326400 | Active TSS | Left Ventricle | heart |
| 47 | chr12:56325400-56326400 | Active TSS | Ovary | ovary |
| 48 | chr12:56325400-56326400 | Active TSS | Rectal Smooth Muscle | rectum |
| 49 | chr12:56325400-56326400 | Active TSS | Spleen | Spleen |
| 50 | chr12:56325400-56326400 | Active TSS | GM12878-XiMat | blood |
