The 2.0 version of rSNPBase

Variant report

Variant rs1681079
Chromosome Location chr12:56304914-56304915
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:56279800-56320000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:56285200-56320000 Weak transcription Pancreas Pancrea
3 chr12:56291000-56308400 Weak transcription Right Atrium heart
4 chr12:56291400-56319000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr12:56292800-56316000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr12:56293000-56307800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr12:56293200-56307000 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr12:56293200-56307200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr12:56293200-56307400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr12:56293600-56319200 Weak transcription Primary hematopoietic stem cells blood
11 chr12:56293800-56319600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr12:56294200-56319400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr12:56294400-56313800 Weak transcription Ovary ovary
14 chr12:56294400-56319600 Weak transcription Colon Smooth Muscle Colon
15 chr12:56294600-56308000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr12:56296000-56307800 Weak transcription Rectal Smooth Muscle rectum
17 chr12:56296000-56319600 Weak transcription Right Ventricle heart
18 chr12:56296200-56319400 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr12:56296800-56306800 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr12:56296800-56319600 Weak transcription Placenta Amnion Placenta Amnion
21 chr12:56297000-56315800 Weak transcription Aorta Aorta
22 chr12:56297200-56305400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr12:56297200-56306200 Weak transcription Placenta Placenta
24 chr12:56297200-56306800 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr12:56297200-56306800 Weak transcription Primary T cells from cord blood blood
26 chr12:56297200-56306800 Weak transcription HSMM muscle
27 chr12:56297200-56307600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr12:56297200-56315600 Weak transcription Fetal Brain Female brain
29 chr12:56297200-56315600 Weak transcription Lung lung
30 chr12:56297200-56315800 Weak transcription H9 Cell Line embryonic stem cell
31 chr12:56297200-56319200 Weak transcription Colonic Mucosa Colon
32 chr12:56297200-56319600 Weak transcription Brain Germinal Matrix brain
33 chr12:56297200-56319600 Weak transcription Brain Inferior Temporal Lobe brain
34 chr12:56297200-56320000 Weak transcription Gastric stomach
35 chr12:56297200-56320000 Weak transcription Spleen Spleen
36 chr12:56297400-56305200 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr12:56297400-56306000 Weak transcription Primary T cells fromperipheralblood blood
38 chr12:56297400-56306200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr12:56297400-56306400 Weak transcription Left Ventricle heart
40 chr12:56297400-56306600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr12:56297400-56306800 Weak transcription Adipose Nuclei Adipose
42 chr12:56297400-56306800 Weak transcription Fetal Muscle Leg muscle
43 chr12:56297400-56307000 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr12:56297400-56307000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr12:56297400-56308200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr12:56297400-56313000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr12:56297400-56315800 Weak transcription Stomach Smooth Muscle stomach
48 chr12:56297400-56316000 Weak transcription Thymus Thymus
49 chr12:56297600-56305600 Weak transcription Fetal Thymus thymus
50 chr12:56297600-56306200 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015