Variant report

Variant rs73336399
Chromosome Location chr12:56336646-56336647
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:56326400-56345000 Weak transcription Ovary ovary
2 chr12:56328800-56352200 Weak transcription Small Intestine intestine
3 chr12:56330400-56339200 Genic enhancers Primary T helper cells fromperipheralblood blood
4 chr12:56330400-56339400 Strong transcription Primary hematopoietic stem cells blood
5 chr12:56332000-56339800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr12:56334000-56336800 Genic enhancers Primary T cells from cord blood blood
7 chr12:56334000-56337200 Genic enhancers Primary T helper cells PMA-I stimulated --
8 chr12:56334000-56345000 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr12:56334000-56349800 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr12:56334200-56340000 Genic enhancers Primary T helper naive cells fromperipheralblood blood
11 chr12:56334200-56340200 Strong transcription Placenta Amnion Placenta Amnion
12 chr12:56334200-56343600 Strong transcription Primary B cells from cord blood blood
13 chr12:56334200-56345400 Weak transcription H9 Cell Line embryonic stem cell
14 chr12:56334200-56349800 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr12:56334400-56336800 Strong transcription Spleen Spleen
16 chr12:56334400-56343600 Strong transcription Primary monocytes fromperipheralblood blood
17 chr12:56334400-56343800 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr12:56334400-56345000 Weak transcription Left Ventricle heart
19 chr12:56334400-56345200 Weak transcription Lung lung
20 chr12:56334400-56345400 Weak transcription Liver Liver
21 chr12:56334400-56347400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr12:56334400-56348400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr12:56334400-56349400 Strong transcription Thymus Thymus
24 chr12:56334600-56336800 Strong transcription Colonic Mucosa Colon
25 chr12:56334600-56336800 Strong transcription Fetal Stomach stomach
26 chr12:56334600-56337000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr12:56334600-56337000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr12:56334600-56337000 Strong transcription NHLF lung
29 chr12:56334600-56338200 Strong transcription Muscle Satellite Cultured Cells --
30 chr12:56334600-56339200 Strong transcription GM12878-XiMat blood
31 chr12:56334600-56339800 Strong transcription Esophagus oesophagus
32 chr12:56334600-56340000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr12:56334600-56340200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr12:56334600-56340200 Strong transcription Sigmoid Colon Sigmoid Colon
35 chr12:56334600-56340400 Strong transcription Rectal Mucosa Donor 31 rectum
36 chr12:56334600-56340600 Strong transcription Fetal Adrenal Gland Adrenal Gland
37 chr12:56334600-56340600 Strong transcription Placenta Placenta
38 chr12:56334600-56342400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr12:56334600-56342600 Strong transcription Rectal Mucosa Donor 29 rectum
40 chr12:56334600-56343000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr12:56334600-56343200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr12:56334600-56343400 Strong transcription Primary B cells from peripheral blood blood
43 chr12:56334600-56343600 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr12:56334600-56343600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr12:56334600-56344800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr12:56334600-56345000 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr12:56334600-56345000 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr12:56334600-56345000 Weak transcription Brain Angular Gyrus brain
49 chr12:56334600-56345000 Weak transcription Brain Anterior Caudate brain
50 chr12:56334600-56345200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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