Variant report

Variant	rs7743409
Chromosome Location	chr6:150714011-150714012
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11967695	1.00[AMR][1000 genomes]
rs7357003	1.00[AMR][1000 genomes]
rs9478646	1.00[AMR][1000 genomes]
rs9478651	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763602	chr6:150581193-150720666	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150712200-150719200	Weak transcription	Fetal Intestine Small	intestine
2	chr6:150712600-150714200	Enhancers	Pancreas	Pancrea
3	chr6:150713200-150714200	Flanking Active TSS	Liver	Liver
4	chr6:150713400-150714200	Flanking Active TSS	A549	lung
5	chr6:150713400-150714400	Enhancers	Stomach Mucosa	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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