Variant report
| Variant | rs775627 |
|---|---|
| Chromosome Location | chr12:67665340-67665341 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:67661800-67665400 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 2 | chr12:67661800-67665400 | Active TSS | H1 Cell Line | embryonic stem cell |
| 3 | chr12:67661800-67665400 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr12:67661800-67665600 | Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 5 | chr12:67661800-67666000 | Active TSS | NHLF | lung |
| 6 | chr12:67662000-67665400 | Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 7 | chr12:67662000-67665600 | Active TSS | NHDF-Ad | bronchial |
| 8 | chr12:67662200-67665400 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 9 | chr12:67662200-67665400 | Active TSS | HSMMtube | muscle |
| 10 | chr12:67662200-67665600 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 11 | chr12:67662200-67666200 | Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 12 | chr12:67662400-67665400 | Active TSS | Skeletal Muscle Female | skeletal muscle |
| 13 | chr12:67662400-67665600 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
| 14 | chr12:67662400-67665800 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 15 | chr12:67662400-67666200 | Active TSS | HMEC | breast |
| 16 | chr12:67662600-67665400 | Active TSS | Fetal Lung | lung |
| 17 | chr12:67663800-67665400 | Flanking Active TSS | Primary T helper cells fromperipheralblood | blood |
| 18 | chr12:67664000-67665400 | Flanking Active TSS | Primary T helper naive cells fromperipheralblood | blood |
| 19 | chr12:67664000-67665400 | Active TSS | Brain Germinal Matrix | brain |
| 20 | chr12:67664000-67665600 | Flanking Active TSS | Primary T regulatory cells fromperipheralblood | blood |
| 21 | chr12:67664000-67665800 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 22 | chr12:67664200-67665600 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 23 | chr12:67664200-67666200 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 24 | chr12:67664200-67666200 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 25 | chr12:67664400-67665400 | Active TSS | HepG2 | liver |
| 26 | chr12:67664400-67665600 | Flanking Active TSS | Primary T cells from cord blood | blood |
| 27 | chr12:67664400-67665600 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
| 28 | chr12:67664400-67666200 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 29 | chr12:67664400-67666400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 30 | chr12:67664400-67666600 | Weak transcription | Lung | lung |
| 31 | chr12:67664400-67666600 | Weak transcription | Small Intestine | intestine |
| 32 | chr12:67664400-67666600 | Weak transcription | Spleen | Spleen |
| 33 | chr12:67664400-67666800 | Enhancers | Brain Substantia Nigra | brain |
| 34 | chr12:67664400-67669000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 35 | chr12:67664400-67669200 | Weak transcription | Gastric | stomach |
| 36 | chr12:67664400-67669400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 37 | chr12:67664600-67665600 | Flanking Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
| 38 | chr12:67664600-67665600 | Enhancers | Brain Cingulate Gyrus | brain |
| 39 | chr12:67664600-67665600 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
| 40 | chr12:67664600-67666200 | Flanking Active TSS | HUES64 Cell Line | embryonic stem cell |
| 41 | chr12:67664600-67666200 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 42 | chr12:67664600-67666200 | Flanking Active TSS | Dnd41 | blood |
| 43 | chr12:67664600-67666600 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 44 | chr12:67664600-67684000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 45 | chr12:67664800-67665400 | Flanking Active TSS | NH-A | brain |
| 46 | chr12:67664800-67665600 | Flanking Active TSS | Fetal Brain Male | brain |
| 47 | chr12:67664800-67665600 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
| 48 | chr12:67664800-67665600 | Flanking Active TSS | HUVEC | blood vessel |
| 49 | chr12:67664800-67665800 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 50 | chr12:67664800-67666600 | Enhancers | Brain Hippocampus Middle | brain |
