The 2.0 version of rSNPBase

Variant report

Variant rs7768963
Chromosome Location chr6:11360573-11360574
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:11355000-11364000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr6:11355000-11367400 Weak transcription Muscle Satellite Cultured Cells --
3 chr6:11355200-11361000 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr6:11355200-11365200 Weak transcription Left Ventricle heart
5 chr6:11355200-11370800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr6:11357200-11362800 Enhancers HepG2 liver
7 chr6:11357200-11371200 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr6:11357600-11360800 Enhancers Primary neutrophils fromperipheralblood blood
9 chr6:11357600-11362600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr6:11357600-11364200 Weak transcription Right Atrium heart
11 chr6:11357600-11365600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr6:11357600-11367600 Weak transcription Aorta Aorta
13 chr6:11357800-11364600 Weak transcription HUVEC blood vessel
14 chr6:11357800-11365200 Weak transcription Lung lung
15 chr6:11357800-11366600 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr6:11357800-11370400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr6:11358000-11364400 Weak transcription Spleen Spleen
18 chr6:11358000-11367800 Weak transcription Small Intestine intestine
19 chr6:11358200-11360600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr6:11358200-11360800 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr6:11358200-11367400 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr6:11358600-11360600 Genic enhancers Monocytes-CD14+_RO01746 blood
23 chr6:11358600-11361000 Genic enhancers Primary T helper cells PMA-I stimulated --
24 chr6:11358800-11360600 Weak transcription Primary T cells fromperipheralblood blood
25 chr6:11358800-11366400 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr6:11358800-11367000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr6:11359000-11360800 Strong transcription Primary B cells from cord blood blood
28 chr6:11359000-11360800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr6:11359400-11361200 Strong transcription Thymus Thymus
30 chr6:11359400-11369800 Weak transcription Brain Hippocampus Middle brain
31 chr6:11359600-11364200 Weak transcription Placenta Amnion Placenta Amnion
32 chr6:11359600-11366400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr6:11359800-11360600 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr6:11359800-11360600 Weak transcription Stomach Mucosa stomach
35 chr6:11359800-11364000 ZNF genes & repeats GM12878-XiMat blood
36 chr6:11360000-11360600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr6:11360000-11360800 Genic enhancers Primary B cells from peripheral blood blood
38 chr6:11360000-11360800 Genic enhancers Primary T helper cells fromperipheralblood blood
39 chr6:11360000-11361000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr6:11360000-11363600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr6:11360000-11364200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr6:11360000-11364200 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr6:11360000-11366400 Weak transcription Esophagus oesophagus
44 chr6:11360200-11360600 Strong transcription Fetal Thymus thymus
45 chr6:11360200-11361000 Weak transcription Right Ventricle heart
46 chr6:11360200-11362200 Strong transcription Primary T regulatory cells fromperipheralblood blood
47 chr6:11360200-11362800 Weak transcription HMEC breast
48 chr6:11360200-11363600 Weak transcription NHEK skin
49 chr6:11360200-11366800 Weak transcription Duodenum Mucosa Duodenum
50 chr6:11360400-11360800 Genic enhancers Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015