Variant report

Variant	rs7771725
Chromosome Location	chr6:143460840-143460841
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143460478..143463029-chr6:143470036..143472680,2	K562	blood:

rs_ID	r²[population]
rs28525292	0.83[AFR][1000 genomes]
rs6904554	0.83[AFR][1000 genomes]
rs6904971	1.00[YRI][hapmap]
rs6934609	1.00[YRI][hapmap];0.83[AFR][1000 genomes]

Chromatin state (count:72 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143441200-143479000	Weak transcription	NHLF	lung
2	chr6:143443600-143462200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr6:143443800-143498800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr6:143444600-143516400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr6:143445800-143479200	Weak transcription	Lung	lung
6	chr6:143448400-143487400	Weak transcription	Rectal Mucosa Donor 29	rectum
7	chr6:143452000-143497000	Weak transcription	Fetal Stomach	stomach
8	chr6:143452200-143477800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr6:143452800-143461400	Weak transcription	Fetal Heart	heart
10	chr6:143452800-143461800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr6:143452800-143463800	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr6:143453000-143461800	Weak transcription	Cortex derived primary cultured neurospheres	brain
13	chr6:143453000-143462000	Weak transcription	Brain Angular Gyrus	brain
14	chr6:143453000-143462000	Weak transcription	Colon Smooth Muscle	Colon
15	chr6:143453000-143464400	Weak transcription	HSMM	muscle
16	chr6:143453000-143465400	Weak transcription	Rectal Mucosa Donor 31	rectum
17	chr6:143453000-143474200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr6:143453000-143481600	Weak transcription	Right Ventricle	heart
19	chr6:143453000-143497200	Weak transcription	Pancreas	Pancrea
20	chr6:143453000-143508600	Weak transcription	Fetal Lung	lung
21	chr6:143453000-143510600	Weak transcription	Brain Inferior Temporal Lobe	brain
22	chr6:143453200-143470800	Weak transcription	Primary neutrophils fromperipheralblood	blood
23	chr6:143454200-143464000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr6:143456200-143461600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
25	chr6:143456200-143463600	Weak transcription	Psoas Muscle	Psoas
26	chr6:143456400-143462600	Weak transcription	Sigmoid Colon	Sigmoid Colon
27	chr6:143457000-143465400	Weak transcription	HSMMtube	muscle
28	chr6:143457200-143470800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr6:143457800-143463800	Strong transcription	Liver	Liver
30	chr6:143458200-143462200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr6:143458200-143486600	Weak transcription	Aorta	Aorta
32	chr6:143458400-143463400	Weak transcription	Brain Substantia Nigra	brain
33	chr6:143458400-143463600	Weak transcription	Primary T cells fromperipheralblood	blood
34	chr6:143458600-143462600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
35	chr6:143458600-143464000	Weak transcription	Fetal Muscle Leg	muscle
36	chr6:143458600-143468000	Weak transcription	Fetal Intestine Small	intestine
37	chr6:143458600-143479200	Weak transcription	Gastric	stomach
38	chr6:143458800-143461000	Weak transcription	Skeletal Muscle Female	skeletal muscle
39	chr6:143458800-143477800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr6:143458800-143529200	Weak transcription	Primary T cells from cord blood	blood
41	chr6:143459200-143461600	Weak transcription	HUES6 Cell Line	embryonic stem cell
42	chr6:143459200-143461600	Weak transcription	K562	blood
43	chr6:143459200-143463600	Weak transcription	NH-A	brain
44	chr6:143459200-143477800	Weak transcription	Left Ventricle	heart
45	chr6:143459200-143477800	Weak transcription	NHEK	skin
46	chr6:143459200-143479000	Weak transcription	Ovary	ovary
47	chr6:143459200-143479200	Weak transcription	Duodenum Smooth Muscle	Duodenum
48	chr6:143459200-143484200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr6:143459400-143461000	Weak transcription	Fetal Intestine Large	intestine
50	chr6:143459400-143461600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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