The 2.0 version of rSNPBase

Variant report

Variant rs28525292
Chromosome Location chr6:143520424-143520425
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143458800-143529200 Weak transcription Primary T cells from cord blood blood
2 chr6:143479600-143534600 Weak transcription Gastric stomach
3 chr6:143497800-143522800 Weak transcription Fetal Muscle Trunk muscle
4 chr6:143498000-143526000 Weak transcription Duodenum Mucosa Duodenum
5 chr6:143499200-143525400 Weak transcription Esophagus oesophagus
6 chr6:143499200-143534600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr6:143499400-143520800 Weak transcription Lung lung
8 chr6:143501400-143534800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr6:143504800-143521800 Weak transcription Brain Substantia Nigra brain
10 chr6:143505600-143534600 Weak transcription H9 Cell Line embryonic stem cell
11 chr6:143509600-143523200 Weak transcription Adipose Nuclei Adipose
12 chr6:143509600-143524400 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr6:143509800-143523800 Weak transcription Aorta Aorta
14 chr6:143513800-143520600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr6:143514200-143545400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:143514400-143545200 Weak transcription HMEC breast
17 chr6:143515000-143521000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:143516000-143545600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr6:143516400-143525600 Weak transcription Liver Liver
20 chr6:143516800-143525400 Weak transcription Fetal Intestine Small intestine
21 chr6:143517200-143523800 Weak transcription Ovary ovary
22 chr6:143517200-143523800 Weak transcription Right Atrium heart
23 chr6:143517200-143528200 Weak transcription Psoas Muscle Psoas
24 chr6:143517400-143525800 Weak transcription Fetal Stomach stomach
25 chr6:143517800-143525200 Weak transcription Brain Cingulate Gyrus brain
26 chr6:143518000-143524800 Weak transcription HepG2 liver
27 chr6:143518200-143525200 Weak transcription Fetal Intestine Large intestine
28 chr6:143518400-143525000 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr6:143519000-143525200 Weak transcription HSMM muscle
30 chr6:143519800-143520600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr6:143520000-143521000 Weak transcription Fetal Muscle Leg muscle
32 chr6:143520000-143523600 Weak transcription Left Ventricle heart
33 chr6:143520000-143525400 Weak transcription Stomach Smooth Muscle stomach
34 chr6:143520000-143527200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr6:143520200-143521200 Enhancers K562 blood
36 chr6:143520200-143533600 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015