The 2.0 version of rSNPBase

Variant report

Variant rs9390064
Chromosome Location chr6:143511147-143511148
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143444600-143516400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:143458800-143529200 Weak transcription Primary T cells from cord blood blood
3 chr6:143479600-143534600 Weak transcription Gastric stomach
4 chr6:143482400-143511200 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr6:143484400-143519800 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr6:143487000-143516600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr6:143487600-143518000 Weak transcription Fetal Kidney kidney
8 chr6:143497400-143518600 Weak transcription Pancreas Pancrea
9 chr6:143497800-143522800 Weak transcription Fetal Muscle Trunk muscle
10 chr6:143498000-143517800 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr6:143498000-143526000 Weak transcription Duodenum Mucosa Duodenum
12 chr6:143499200-143525400 Weak transcription Esophagus oesophagus
13 chr6:143499200-143534600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr6:143499400-143516800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr6:143499400-143520800 Weak transcription Lung lung
16 chr6:143500400-143515800 Strong transcription K562 blood
17 chr6:143501400-143516600 Weak transcription Psoas Muscle Psoas
18 chr6:143501400-143534800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr6:143501600-143516400 Strong transcription Liver Liver
20 chr6:143502200-143517000 Weak transcription Brain Cingulate Gyrus brain
21 chr6:143504800-143521800 Weak transcription Brain Substantia Nigra brain
22 chr6:143505000-143512800 Weak transcription NHEK skin
23 chr6:143505200-143512800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr6:143505400-143511400 Strong transcription HepG2 liver
25 chr6:143505400-143511800 Strong transcription Fetal Intestine Large intestine
26 chr6:143505400-143513800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr6:143505600-143534600 Weak transcription H9 Cell Line embryonic stem cell
28 chr6:143505800-143515800 Weak transcription Brain Hippocampus Middle brain
29 chr6:143506600-143518400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr6:143506800-143516600 Weak transcription Left Ventricle heart
31 chr6:143507000-143517600 Weak transcription Colonic Mucosa Colon
32 chr6:143507200-143511400 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr6:143509000-143513600 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr6:143509000-143516800 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr6:143509000-143518800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr6:143509600-143511200 Strong transcription Fetal Intestine Small intestine
37 chr6:143509600-143516600 Weak transcription Ovary ovary
38 chr6:143509600-143517600 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr6:143509600-143517800 Weak transcription Fetal Lung lung
40 chr6:143509600-143518000 Weak transcription NH-A brain
41 chr6:143509600-143523200 Weak transcription Adipose Nuclei Adipose
42 chr6:143509600-143524400 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr6:143509800-143519800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:143509800-143523800 Weak transcription Aorta Aorta
45 chr6:143510000-143514000 Weak transcription HMEC breast
46 chr6:143510400-143515800 Weak transcription Fetal Stomach stomach
47 chr6:143510400-143516200 Weak transcription Fetal Muscle Leg muscle
48 chr6:143510600-143511400 Enhancers HUVEC blood vessel
49 chr6:143510600-143511400 Enhancers Osteobl bone
50 chr6:143510800-143511400 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015