The 2.0 version of rSNPBase

Variant report

Variant rs9399427
Chromosome Location chr6:143500462-143500463
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143444600-143516400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:143453000-143508600 Weak transcription Fetal Lung lung
3 chr6:143453000-143510600 Weak transcription Brain Inferior Temporal Lobe brain
4 chr6:143458800-143529200 Weak transcription Primary T cells from cord blood blood
5 chr6:143459600-143505400 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr6:143463000-143508400 Weak transcription Stomach Smooth Muscle stomach
7 chr6:143477000-143501200 Weak transcription Right Atrium heart
8 chr6:143479600-143508600 Weak transcription Colon Smooth Muscle Colon
9 chr6:143479600-143534600 Weak transcription Gastric stomach
10 chr6:143480200-143501200 Weak transcription Brain Angular Gyrus brain
11 chr6:143482400-143511200 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr6:143484400-143519800 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr6:143485200-143509400 Weak transcription H1 Cell Line embryonic stem cell
14 chr6:143486000-143501400 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr6:143486000-143510400 Weak transcription Brain Anterior Caudate brain
16 chr6:143487000-143516600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr6:143487200-143506400 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr6:143487600-143508600 Weak transcription Ovary ovary
19 chr6:143487600-143518000 Weak transcription Fetal Kidney kidney
20 chr6:143488400-143510400 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr6:143488600-143506400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr6:143495800-143500600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr6:143495800-143509800 Weak transcription Primary B cells from cord blood blood
24 chr6:143496000-143501200 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr6:143496000-143509400 Weak transcription Right Ventricle heart
26 chr6:143496400-143500600 Strong transcription Fetal Intestine Large intestine
27 chr6:143496600-143505600 Weak transcription Brain Hippocampus Middle brain
28 chr6:143496600-143508400 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr6:143497400-143518600 Weak transcription Pancreas Pancrea
30 chr6:143497800-143522800 Weak transcription Fetal Muscle Trunk muscle
31 chr6:143498000-143501200 Weak transcription Adipose Nuclei Adipose
32 chr6:143498000-143503600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr6:143498000-143505000 Weak transcription Fetal Stomach stomach
34 chr6:143498000-143507600 Weak transcription Fetal Brain Female brain
35 chr6:143498000-143510200 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr6:143498000-143511000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr6:143498000-143517800 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr6:143498000-143526000 Weak transcription Duodenum Mucosa Duodenum
39 chr6:143498200-143502400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr6:143498200-143504800 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr6:143498200-143504800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr6:143498200-143509400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr6:143498400-143501400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr6:143498600-143501200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr6:143498600-143501400 Weak transcription NHDF-Ad bronchial
46 chr6:143498600-143505400 Weak transcription HepG2 liver
47 chr6:143498600-143507800 Weak transcription NH-A brain
48 chr6:143498800-143502000 Weak transcription Osteobl bone
49 chr6:143498800-143504600 Weak transcription NHEK skin
50 chr6:143498800-143508600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015