Variant report
| Variant | rs9399428 |
|---|---|
| Chromosome Location | chr6:143524864-143524865 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:143458800-143529200 | Weak transcription | Primary T cells from cord blood | blood |
| 2 | chr6:143479600-143534600 | Weak transcription | Gastric | stomach |
| 3 | chr6:143498000-143526000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 4 | chr6:143499200-143525400 | Weak transcription | Esophagus | oesophagus |
| 5 | chr6:143499200-143534600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 6 | chr6:143501400-143534800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 7 | chr6:143505600-143534600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 8 | chr6:143514200-143545400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 9 | chr6:143514400-143545200 | Weak transcription | HMEC | breast |
| 10 | chr6:143516000-143545600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 11 | chr6:143516400-143525600 | Weak transcription | Liver | Liver |
| 12 | chr6:143516800-143525400 | Weak transcription | Fetal Intestine Small | intestine |
| 13 | chr6:143517200-143528200 | Weak transcription | Psoas Muscle | Psoas |
| 14 | chr6:143517400-143525800 | Weak transcription | Fetal Stomach | stomach |
| 15 | chr6:143517800-143525200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 16 | chr6:143518200-143525200 | Weak transcription | Fetal Intestine Large | intestine |
| 17 | chr6:143518400-143525000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 18 | chr6:143519000-143525200 | Weak transcription | HSMM | muscle |
| 19 | chr6:143520000-143525400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 20 | chr6:143520000-143527200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 21 | chr6:143520200-143533600 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 22 | chr6:143521000-143526400 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 23 | chr6:143522800-143526000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 24 | chr6:143523400-143526600 | Weak transcription | Brain Angular Gyrus | brain |
| 25 | chr6:143524200-143525200 | Weak transcription | Aorta | Aorta |
| 26 | chr6:143524200-143525200 | Weak transcription | Left Ventricle | heart |
| 27 | chr6:143524400-143525800 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
| 28 | chr6:143524400-143526000 | Weak transcription | Fetal Heart | heart |
| 29 | chr6:143524400-143535200 | Weak transcription | Right Atrium | heart |
| 30 | chr6:143524600-143525000 | ZNF genes & repeats | Colon Smooth Muscle | Colon |
| 31 | chr6:143524600-143531200 | Strong transcription | K562 | blood |
| 32 | chr6:143524800-143525600 | ZNF genes & repeats | HepG2 | liver |
