Variant report

Variant	rs7792420
Chromosome Location	chr7:122132311-122132312
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10225954	1.00[AFR][1000 genomes]
rs10236218	1.00[AFR][1000 genomes]
rs10236229	1.00[AFR][1000 genomes]
rs10248311	1.00[AFR][1000 genomes]
rs10257674	0.83[AFR][1000 genomes]
rs10260132	1.00[AFR][1000 genomes]
rs10266367	1.00[AFR][1000 genomes]
rs10276116	1.00[AFR][1000 genomes]
rs2058444	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122047000-122155400	Weak transcription	Left Ventricle	heart
2	chr7:122091400-122132800	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr7:122115400-122140000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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