Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10488595	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10488596	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10488597	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10954565	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10954566	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11771119	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12531447	1.00[ASN][1000 genomes]
rs12533282	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12534748	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12536604	1.00[ASN][1000 genomes]
rs12536640	1.00[ASN][1000 genomes]
rs12537831	1.00[JPT][hapmap]
rs12670040	1.00[JPT][hapmap]
rs13222744	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13223210	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13223738	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13233131	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13233495	1.00[ASN][1000 genomes]
rs13235508	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13235822	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13243456	1.00[ASN][1000 genomes]
rs1424574	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17409631	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17409769	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17487790	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17494540	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17494589	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs34636077	1.00[ASN][1000 genomes]
rs35310233	1.00[ASN][1000 genomes]
rs7785651	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7811987	1.00[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136544800-136548000	Weak transcription	Rectal Smooth Muscle	rectum
2	chr7:136545200-136548600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr7:136545200-136548600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr7:136547600-136549200	Enhancers	Colon Smooth Muscle	Colon

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