Variant report
| Variant | rs7797592 |
|---|---|
| Chromosome Location | chr7:103706638-103706639 |
| allele | A/G |
| Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:103705230..103707654-chr7:103709368..103711788,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
| rs_ID | r2[population] |
|---|---|
| rs10215768 | 0.82[ASN][1000 genomes] |
| rs10240155 | 0.80[ASN][1000 genomes] |
| rs10240408 | 0.86[ASN][1000 genomes] |
| rs10240682 | 0.86[ASN][1000 genomes] |
| rs10252269 | 0.89[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs10255340 | 0.86[ASN][1000 genomes] |
| rs10256829 | 0.89[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs10281061 | 0.89[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs10282214 | 0.92[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs11971200 | 0.81[AMR][1000 genomes] |
| rs1858811 | 0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs2157800 | 0.89[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs2384982 | 0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs34714175 | 0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs4727586 | 0.82[ASN][1000 genomes] |
| rs4729945 | 0.86[ASN][1000 genomes] |
| rs4729946 | 0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs4729947 | 0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs55914768 | 0.81[AMR][1000 genomes];0.88[ASN][1000 genomes] |
| rs56022599 | 0.80[ASN][1000 genomes] |
| rs58765880 | 0.86[ASN][1000 genomes] |
| rs66797006 | 0.80[ASN][1000 genomes] |
| rs66918163 | 0.86[ASN][1000 genomes] |
| rs6955592 | 0.88[ASN][1000 genomes] |
| rs756742 | 0.89[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs7797632 | 0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs7797741 | 0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs7797777 | 0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv888924 | chr7:103637906-103706936 | Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats | Chromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
| 2 | nsv1018253 | chr7:103669491-103731850 | Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:103706400-103708600 | Enhancers | HepG2 | liver |





