Variant report

Variant	rs4727586
Chromosome Location	chr7:103706936-103706937
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:103705230..103707654-chr7:103709368..103711788,2	K562	blood:

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs1024817	0.88[MEX][hapmap]
rs10256884	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10261266	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10480652	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10953402	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11971200	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12536622	0.96[ASN][1000 genomes]
rs12539921	0.94[ASN][1000 genomes]
rs17158452	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs17158464	0.91[ASN][1000 genomes]
rs1858812	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs194845	0.87[MEX][hapmap]
rs2384982	0.81[ASN][1000 genomes]
rs34714175	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4729948	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4729950	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4729951	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4729952	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4729953	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4729954	0.93[ASN][1000 genomes]
rs4729955	0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs4729956	0.96[ASN][1000 genomes]
rs4729959	0.81[ASN][1000 genomes]
rs4729960	0.86[JPT][hapmap];0.81[ASN][1000 genomes]
rs55695552	0.90[EUR][1000 genomes]
rs56022599	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs56325675	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60297107	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs66797006	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs67580058	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs6970904	1.00[CEU][hapmap]
rs73185501	0.89[ASN][1000 genomes]
rs73187416	0.92[ASN][1000 genomes]
rs73187435	0.86[ASN][1000 genomes]
rs756744	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7797592	0.82[ASN][1000 genomes]
rs7797632	0.82[EUR][1000 genomes]
rs7797741	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7797777	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7798617	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888924	chr7:103637906-103706936	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1018253	chr7:103669491-103731850	Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103706400-103708600	Enhancers	HepG2	liver

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