Variant report
| Variant | rs73187435 |
|---|---|
| Chromosome Location | chr7:103721393-103721394 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:103713795..103716448-chr7:103718783..103721474,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs10215768 | 0.82[ASN][1000 genomes] |
| rs10239281 | 0.80[EUR][1000 genomes] |
| rs11773168 | 0.82[EUR][1000 genomes] |
| rs11984388 | 0.82[EUR][1000 genomes] |
| rs12536622 | 0.87[ASN][1000 genomes] |
| rs12539921 | 0.80[ASN][1000 genomes] |
| rs12705177 | 0.82[EUR][1000 genomes] |
| rs194827 | 0.81[EUR][1000 genomes] |
| rs194829 | 0.85[EUR][1000 genomes] |
| rs194839 | 0.81[EUR][1000 genomes] |
| rs194840 | 0.83[EUR][1000 genomes] |
| rs194842 | 0.83[EUR][1000 genomes] |
| rs194850 | 0.83[EUR][1000 genomes] |
| rs194852 | 0.83[EUR][1000 genomes] |
| rs194853 | 0.83[EUR][1000 genomes] |
| rs194854 | 0.83[EUR][1000 genomes] |
| rs194855 | 0.81[EUR][1000 genomes] |
| rs194856 | 0.80[EUR][1000 genomes] |
| rs194862 | 0.80[EUR][1000 genomes] |
| rs194863 | 0.80[EUR][1000 genomes] |
| rs194866 | 0.80[EUR][1000 genomes] |
| rs2299407 | 0.82[EUR][1000 genomes] |
| rs3808011 | 0.82[EUR][1000 genomes] |
| rs3808012 | 0.82[EUR][1000 genomes] |
| rs3808013 | 0.82[EUR][1000 genomes] |
| rs3808014 | 0.84[EUR][1000 genomes] |
| rs3808015 | 0.82[EUR][1000 genomes] |
| rs4727586 | 0.86[ASN][1000 genomes] |
| rs4729955 | 0.80[ASN][1000 genomes] |
| rs4729956 | 0.87[ASN][1000 genomes] |
| rs4729959 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs4729960 | 0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs55848 | 0.83[EUR][1000 genomes] |
| rs56022599 | 0.83[ASN][1000 genomes] |
| rs66797006 | 0.83[ASN][1000 genomes] |
| rs67580058 | 0.82[ASN][1000 genomes] |
| rs6944360 | 0.82[EUR][1000 genomes] |
| rs6944653 | 0.82[EUR][1000 genomes] |
| rs6952639 | 0.82[EUR][1000 genomes] |
| rs9641322 | 0.81[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1018253 | chr7:103669491-103731850 | Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:103720400-103721400 | Enhancers | HepG2 | liver |
