Variant report
Variant | rs7824654 |
---|---|
Chromosome Location | chr8:91223229-91223230 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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(count:2 , 50 per page) page:
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rs_ID | r2[population] |
---|---|
rs12056604 | 1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs12544366 | 0.86[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs12545140 | 0.83[AMR][1000 genomes] |
rs12546302 | 0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12547394 | 0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12549515 | 0.85[AMR][1000 genomes] |
rs12549630 | 0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs12549660 | 0.84[AMR][1000 genomes] |
rs12549875 | 1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12550324 | 0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs16904149 | 0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2189257 | 0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2285725 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs59497517 | 0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6470808 | 0.80[YRI][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs67422313 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7016389 | 0.86[AMR][1000 genomes] |
rs72606643 | 1.00[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs72606646 | 0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs72606647 | 0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs72606648 | 0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs72606649 | 0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs72606650 | 0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs72606651 | 0.86[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs72606652 | 0.86[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs72606653 | 0.86[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs72606654 | 0.82[EUR][1000 genomes] |
rs72606655 | 0.86[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs72606656 | 0.86[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs72606657 | 0.82[AMR][1000 genomes] |
rs7826142 | 1.00[EUR][1000 genomes] |
rs970473 | 0.83[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2758164 | chr8:91000786-91329669 | Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
2 | esv2759628 | chr8:91000786-91329669 | Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
3 | esv2757281 | chr8:91090821-91235335 | Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
4 | nsv470225 | chr8:91113616-91229254 | Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 10 gene(s) | inside rSNPs | diseases |
5 | esv35109 | chr8:91150726-91226940 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers | Chromatin interactive region | 8 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:91223200-91224200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
2 | chr8:91223200-91224200 | Enhancers | K562 | blood |