Variant report

Variant	rs72606651
Chromosome Location	chr8:91252939-91252940
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:91185537..91188064-chr8:91252722..91255551,2	K562	blood:
2	chr8:91235807..91240613-chr8:91250967..91255237,5	K562	blood:
3	chr8:91078574..91081154-chr8:91252454..91254106,2	K562	blood:
4	chr8:91248190..91250217-chr8:91251459..91253736,3	MCF-7	breast:
5	chr8:91250919..91253356-chr8:91253452..91256356,4	K562	blood:
6	chr8:91022020..91023548-chr8:91252293..91254281,2	K562	blood:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10108327	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12056604	0.82[EUR][1000 genomes]
rs12544366	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12544776	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12545140	0.97[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12546302	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12547394	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12549515	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12549630	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12549660	0.99[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12549875	0.82[EUR][1000 genomes]
rs12550324	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16904149	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs16904193	0.93[ASN][1000 genomes]
rs16904195	0.93[ASN][1000 genomes]
rs2189257	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2285725	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4735301	0.93[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs59497517	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6470808	0.86[EUR][1000 genomes]
rs6470854	0.82[EUR][1000 genomes]
rs6470856	0.82[EUR][1000 genomes]
rs67422313	0.84[EUR][1000 genomes]
rs7016389	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72606643	0.82[EUR][1000 genomes]
rs72606646	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72606647	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72606648	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72606649	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72606650	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72606652	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72606653	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72606654	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72606655	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72606656	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72606657	0.96[AMR][1000 genomes]
rs7824654	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7826142	0.82[EUR][1000 genomes]
rs970473	0.97[AMR][1000 genomes];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91252600-91256600	Weak transcription	K562	blood

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