Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11990584	0.92[EUR][1000 genomes]
rs11990626	0.92[EUR][1000 genomes]
rs11991428	0.92[EUR][1000 genomes]
rs11991842	1.00[CEU][hapmap]
rs11993732	1.00[CEU][hapmap]
rs16874557	0.85[EUR][1000 genomes]
rs28924708	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs57356491	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73309264	0.92[EUR][1000 genomes]
rs73309267	0.92[EUR][1000 genomes]
rs73699586	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73699587	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73699588	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73699591	0.85[EUR][1000 genomes]
rs73699593	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73699594	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73699596	1.00[EUR][1000 genomes]
rs7827001	0.92[EUR][1000 genomes]
rs7830033	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7838299	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533134	chr8:107307812-107670002	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3417427	chr8:107572825-107590283	Weak transcription Genic enhancers Enhancers Active TSS Bivalent Enhancer Strong transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107512400-107620200	Weak transcription	Aorta	Aorta
2	chr8:107569200-107580600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr8:107573800-107589800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:107576000-107580200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr8:107579200-107579800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr8:107579200-107579800	Enhancers	Brain Germinal Matrix	brain
7	chr8:107579400-107579800	Enhancers	Colon Smooth Muscle	Colon

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