Variant report

Variant	rs7831732
Chromosome Location	chr8:130469412-130469413
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10103083	0.95[CEU][hapmap];0.97[EUR][1000 genomes]
rs1030626	0.80[EUR][1000 genomes]
rs1124682	0.96[CEU][hapmap];0.81[GIH][hapmap];0.95[MEX][hapmap];0.93[TSI][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12681076	0.80[EUR][1000 genomes]
rs1465680	0.96[CEU][hapmap];0.81[GIH][hapmap];0.93[TSI][hapmap];0.97[EUR][1000 genomes]
rs17177561	0.81[YRI][hapmap]
rs1963881	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2007003	0.96[CEU][hapmap];0.86[GIH][hapmap];0.95[TSI][hapmap];0.97[EUR][1000 genomes]
rs2012753	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4733707	0.80[ASW][hapmap];0.96[CEU][hapmap];0.95[MEX][hapmap];0.93[TSI][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs744652	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs7845244	0.86[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015611	chr8:130449321-130502086	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130459400-130471800	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr8:130463400-130470400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr8:130464600-130471800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:130465400-130472000	Genic enhancers	K562	blood
5	chr8:130468800-130471400	Weak transcription	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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