Variant report

Variant	rs7836158
Chromosome Location	chr8:107298930-107298931
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:107297724..107300647-chr8:107304478..107306215,2	K562	blood:

rs_ID	r²[population]
rs11996443	1.00[EUR][1000 genomes]
rs16874230	1.00[EUR][1000 genomes]
rs16874259	1.00[EUR][1000 genomes]
rs16874332	1.00[EUR][1000 genomes]
rs16874403	1.00[EUR][1000 genomes]
rs16874438	1.00[EUR][1000 genomes]
rs58458066	1.00[EUR][1000 genomes]
rs61669783	1.00[EUR][1000 genomes]
rs6988902	1.00[EUR][1000 genomes]
rs6995675	1.00[EUR][1000 genomes]
rs73297443	1.00[EUR][1000 genomes]
rs73297450	1.00[EUR][1000 genomes]
rs7841522	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107284200-107299600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:107284800-107331800	Weak transcription	Aorta	Aorta
3	chr8:107285000-107301200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:107290200-107312400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr8:107293800-107299800	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr8:107295600-107312000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr8:107296400-107301600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr8:107296600-107300400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr8:107296800-107299600	Weak transcription	Fetal Lung	lung
10	chr8:107297400-107300600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr8:107297800-107300400	Enhancers	Rectal Smooth Muscle	rectum
12	chr8:107298000-107299000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr8:107298000-107299400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr8:107298000-107300400	Enhancers	Primary hematopoietic stem cells	blood
15	chr8:107298400-107299600	Weak transcription	Fetal Stomach	stomach
16	chr8:107298400-107300200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr8:107298400-107300200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr8:107298400-107300200	Weak transcription	Fetal Muscle Leg	muscle
19	chr8:107298400-107305000	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr8:107298600-107299600	Weak transcription	NHLF	lung
21	chr8:107298600-107300200	Weak transcription	Cortex derived primary cultured neurospheres	brain
22	chr8:107298600-107300600	Enhancers	Primary hematopoietic stem cells short term culture	blood
23	chr8:107298600-107301600	Weak transcription	Fetal Kidney	kidney

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links