Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:117546736..117548542-chr9:117559048..117560733,2	MCF-7	breast:
2	chr9:117551978..117554361-chr9:117558234..117561272,3	K562	blood:

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11793394	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs1407308	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs17219926	0.90[ASN][1000 genomes]
rs3181354	1.00[JPT][hapmap]
rs55775610	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs726658	1.00[JPT][hapmap]
rs72756541	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7866570	0.90[ASN][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs7847158	ASTN2	cis	cerebellum	SCAN
rs7847158	ORM2	cis	parietal	SCAN

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:117542000-117561800	Weak transcription	Pancreas	Pancrea
2	chr9:117542400-117561200	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr9:117545400-117561400	Weak transcription	Gastric	stomach
4	chr9:117547800-117561200	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr9:117548000-117565400	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr9:117548400-117561800	Weak transcription	Esophagus	oesophagus
7	chr9:117549400-117560800	Weak transcription	Rectal Mucosa Donor 29	rectum
8	chr9:117551600-117560400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr9:117551600-117560800	Weak transcription	HMEC	breast
10	chr9:117552800-117561200	Weak transcription	Placenta	Placenta
11	chr9:117553000-117561400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr9:117553000-117561800	Weak transcription	Lung	lung
13	chr9:117553400-117565200	Weak transcription	HUVEC	blood vessel
14	chr9:117554600-117560800	Weak transcription	Duodenum Mucosa	Duodenum
15	chr9:117554800-117560400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr9:117555000-117560800	Weak transcription	Fetal Intestine Small	intestine
17	chr9:117555800-117560400	Weak transcription	Fetal Intestine Large	intestine
18	chr9:117559600-117564400	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr9:117560200-117561000	Weak transcription	Fetal Kidney	kidney
20	chr9:117560200-117561400	Enhancers	A549	lung
21	chr9:117560200-117562400	Enhancers	Fetal Stomach	stomach

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