Variant report

Variant	rs7860644
Chromosome Location	chr9:103478672-103478673
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10819811	0.94[ASN][1000 genomes]
rs10989220	0.87[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs12339177	0.87[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs12346541	0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs12350460	0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs4076912	0.81[EUR][1000 genomes]
rs4743414	0.80[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4743415	0.85[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs62577651	0.87[AMR][1000 genomes]
rs62577652	0.86[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7022939	0.81[CHB][hapmap]
rs7851200	0.92[ASN][1000 genomes]
rs9299341	0.81[CHB][hapmap]
rs9721433	0.89[AMR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1036417	chr9:103478028-103509840	Enhancers Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:103478000-103481000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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