Variant report

Variant	rs7851200
Chromosome Location	chr9:103452501-103452502
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10283519	0.80[EUR][1000 genomes]
rs10819811	0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10989206	0.80[EUR][1000 genomes]
rs10989209	0.80[EUR][1000 genomes]
rs10989210	0.80[EUR][1000 genomes]
rs10989220	0.87[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12339177	0.87[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs12346541	0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs12350460	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs36196957	0.80[EUR][1000 genomes]
rs4742790	0.80[EUR][1000 genomes]
rs4743411	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4743412	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4743414	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs4743415	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs62577651	0.83[AMR][1000 genomes]
rs62577652	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7860644	0.92[ASN][1000 genomes]
rs9721433	0.85[AMR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:103450000-103472400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:103450400-103452800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr9:103451200-103452800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr9:103451200-103453200	Enhancers	Dnd41	blood
5	chr9:103451400-103452800	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr9:103451600-103453000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr9:103451800-103452600	Enhancers	Primary T cells from cord blood	blood
8	chr9:103451800-103452800	Enhancers	GM12878-XiMat	blood
9	chr9:103452200-103452800	Enhancers	Thymus	Thymus
10	chr9:103452400-103452800	Enhancers	Primary hematopoietic stem cells	blood
11	chr9:103452400-103453000	Enhancers	ES-I3 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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