The 2.0 version of rSNPBase

Variant report

Variant rs7862940
Chromosome Location chr9:21317985-21317986
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:21309800-21322600 Weak transcription Brain Substantia Nigra brain
2 chr9:21312200-21322000 Weak transcription GM12878-XiMat blood
3 chr9:21315000-21323000 Weak transcription Thymus Thymus
4 chr9:21316200-21318600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr9:21316200-21322800 Weak transcription Fetal Lung lung
6 chr9:21316400-21318800 Enhancers Cortex derived primary cultured neurospheres brain
7 chr9:21316400-21319000 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr9:21316400-21322800 Weak transcription Stomach Smooth Muscle stomach
9 chr9:21316600-21321200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr9:21316600-21322600 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr9:21316600-21322600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr9:21316600-21322800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr9:21316600-21322800 Weak transcription Lung lung
14 chr9:21316600-21323000 Weak transcription Pancreas Pancrea
15 chr9:21316600-21330600 Weak transcription Small Intestine intestine
16 chr9:21316800-21319000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr9:21316800-21322800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr9:21317000-21318600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr9:21317000-21318600 Weak transcription Adipose Nuclei Adipose
20 chr9:21317000-21320400 Weak transcription Brain Hippocampus Middle brain
21 chr9:21317000-21321200 Weak transcription Primary B cells from cord blood blood
22 chr9:21317000-21321200 Weak transcription Colon Smooth Muscle Colon
23 chr9:21317000-21326800 Weak transcription Hela-S3 cervix
24 chr9:21317200-21318000 Weak transcription NHEK skin
25 chr9:21317200-21320600 Weak transcription Liver Liver
26 chr9:21317200-21322800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr9:21317200-21323000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr9:21317200-21323000 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr9:21317200-21331600 Weak transcription Esophagus oesophagus
30 chr9:21317200-21331600 Weak transcription Gastric stomach
31 chr9:21317400-21318000 Weak transcription HMEC breast
32 chr9:21317400-21321400 Weak transcription Osteobl bone
33 chr9:21317400-21323000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr9:21317600-21318000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr9:21317600-21321600 Weak transcription Primary monocytes fromperipheralblood blood
36 chr9:21317800-21318000 Weak transcription Brain Anterior Caudate brain
37 chr9:21317800-21319000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr9:21317800-21319000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015