Variant report

Variant	rs7865094
Chromosome Location	chr9:110530761-110530762
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs10733564	1.00[AFR][1000 genomes]
rs12553971	1.00[AFR][1000 genomes]
rs6477596	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427850	chr9:110456613-110632324	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv428221	chr9:110456613-110632324	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv508561	chr9:110506336-110545367	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110518200-110544600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr9:110523200-110535200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr9:110529000-110531000	Enhancers	Adipose Nuclei	Adipose
4	chr9:110530400-110530800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr9:110530400-110530800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr9:110530400-110530800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
7	chr9:110530400-110530800	Enhancers	Placenta	Placenta
8	chr9:110530400-110531000	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr9:110530400-110531000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
10	chr9:110530400-110531000	Enhancers	Lung	lung
11	chr9:110530400-110531000	Enhancers	HUVEC	blood vessel
12	chr9:110530600-110530800	Weak transcription	Left Ventricle	heart
13	chr9:110530600-110531000	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr9:110530600-110531000	Enhancers	Fetal Muscle Leg	muscle
15	chr9:110530600-110531200	Enhancers	H1 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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