Variant report

Variant	rs7904551
Chromosome Location	chr10:23550341-23550342
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10828425	0.86[EUR][1000 genomes]
rs10828427	0.86[EUR][1000 genomes]
rs11013369	0.92[EUR][1000 genomes]
rs11013377	0.86[EUR][1000 genomes]
rs11013378	0.86[EUR][1000 genomes]
rs11013386	0.86[EUR][1000 genomes]
rs11813971	0.92[EUR][1000 genomes]
rs12217944	0.86[EUR][1000 genomes]
rs12569400	0.86[EUR][1000 genomes]
rs12571348	0.89[EUR][1000 genomes]
rs4587637	0.92[EUR][1000 genomes]
rs4747460	0.86[EUR][1000 genomes]
rs4747461	0.86[EUR][1000 genomes]
rs4748853	0.86[EUR][1000 genomes]
rs4748861	0.86[EUR][1000 genomes]
rs72648296	0.86[EUR][1000 genomes]
rs7904429	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831810	chr10:23445647-23605270	Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv466834	chr10:23482635-23623523	Weak transcription Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv550213	chr10:23482635-23623523	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23550200-23551400	Enhancers	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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