Variant report
| Variant | rs7908842 |
|---|---|
| Chromosome Location | chr10:44075959-44075960 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
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| No data |
| No data |
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rSNPs within LD-proxies of this variant (count:27)
| rs_ID | r2[population] |
|---|---|
| rs1338567 | 1.00[ASN][1000 genomes] |
| rs1338568 | 1.00[ASN][1000 genomes] |
| rs1338569 | 1.00[ASN][1000 genomes] |
| rs1361227 | 1.00[ASN][1000 genomes] |
| rs1361228 | 1.00[ASN][1000 genomes] |
| rs17153908 | 0.95[AFR][1000 genomes] |
| rs17153912 | 0.93[AFR][1000 genomes] |
| rs1832466 | 1.00[ASN][1000 genomes] |
| rs1832472 | 1.00[ASN][1000 genomes] |
| rs2999237 | 1.00[ASN][1000 genomes] |
| rs2999238 | 1.00[ASN][1000 genomes] |
| rs2999239 | 1.00[ASN][1000 genomes] |
| rs2999240 | 1.00[ASN][1000 genomes] |
| rs2999241 | 1.00[ASN][1000 genomes] |
| rs2999242 | 1.00[ASN][1000 genomes] |
| rs3006364 | 1.00[ASN][1000 genomes] |
| rs3006365 | 1.00[ASN][1000 genomes] |
| rs3006378 | 1.00[ASN][1000 genomes] |
| rs3006381 | 1.00[ASN][1000 genomes] |
| rs3006382 | 1.00[ASN][1000 genomes] |
| rs3006389 | 1.00[ASN][1000 genomes] |
| rs7075288 | 1.00[ASN][1000 genomes] |
| rs7079327 | 1.00[ASN][1000 genomes] |
| rs7084457 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72787457 | 1.00[ASN][1000 genomes] |
| rs72787487 | 1.00[ASN][1000 genomes] |
| rs7922477 | 1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:44072400-44080600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
