Variant report

Variant	rs3006381
Chromosome Location	chr10:44046172-44046173
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44045670..44047822-chr10:44049700..44053652,4	K562	blood:
2	chr10:44045650..44047749-chr10:44050883..44052387,2	K562	blood:

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs11238575	1.00[CHB][hapmap]
rs11238595	0.90[CEU][hapmap];1.00[CHB][hapmap]
rs1338567	1.00[ASN][1000 genomes]
rs1338568	1.00[ASN][1000 genomes]
rs1338569	1.00[ASN][1000 genomes]
rs1361227	1.00[ASN][1000 genomes]
rs1361228	1.00[ASN][1000 genomes]
rs17153601	1.00[CHB][hapmap]
rs17154024	0.85[CEU][hapmap]
rs17366781	1.00[CHB][hapmap]
rs1832466	1.00[ASN][1000 genomes]
rs1832472	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2261637	1.00[CHB][hapmap]
rs2265955	1.00[CHB][hapmap]
rs2393949	1.00[CHB][hapmap]
rs2819025	1.00[CHB][hapmap]
rs2999237	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2999238	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2999239	1.00[ASN][1000 genomes]
rs2999240	1.00[ASN][1000 genomes]
rs2999241	1.00[ASN][1000 genomes]
rs2999242	1.00[ASN][1000 genomes]
rs2999290	1.00[CHB][hapmap]
rs3006364	1.00[ASN][1000 genomes]
rs3006365	1.00[ASN][1000 genomes]
rs3006378	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3006382	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3006389	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs4948727	1.00[CHB][hapmap]
rs7068859	1.00[CHB][hapmap]
rs7069748	1.00[CHB][hapmap]
rs7075288	0.92[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.87[LWK][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7079327	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7084457	1.00[ASN][1000 genomes]
rs7084621	1.00[CHB][hapmap]
rs72787457	1.00[ASN][1000 genomes]
rs72787487	1.00[ASN][1000 genomes]
rs7478426	1.00[CHB][hapmap]
rs7908842	1.00[ASN][1000 genomes]
rs7922477	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44043200-44051600	Weak transcription	Brain Anterior Caudate	brain
2	chr10:44044400-44050800	Weak transcription	Fetal Lung	lung

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