Variant report

Variant	rs7910941
Chromosome Location	chr10:26472469-26472470
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1568463	1.00[AMR][1000 genomes]
rs16926537	1.00[AMR][1000 genomes]
rs16926544	1.00[AMR][1000 genomes]
rs16926632	1.00[AMR][1000 genomes]
rs16926652	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16926671	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16926674	1.00[AMR][1000 genomes]
rs16926677	1.00[AMR][1000 genomes]
rs16926745	1.00[AMR][1000 genomes]
rs16926747	1.00[AMR][1000 genomes]
rs2051085	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2368124	1.00[AMR][1000 genomes]
rs4592324	1.00[AMR][1000 genomes]
rs7080297	1.00[AMR][1000 genomes]
rs7085789	1.00[AMR][1000 genomes]
rs7896603	1.00[AMR][1000 genomes]
rs7897779	1.00[AMR][1000 genomes]
rs7914958	1.00[AMR][1000 genomes]
rs8190587	1.00[AMR][1000 genomes]
rs8190623	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894975	chr10:26343356-27014467	Strong transcription Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26440800-26473400	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr10:26464600-26478000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links